BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0730.1
(655 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 399 e-126
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 399 e-126
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 223 4e-68
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 125 7e-33
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 84 3e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 399 bits (1024), Expect = e-126, Method: Compositional matrix adjust.
Identities = 187/434 (43%), Positives = 276/434 (63%), Gaps = 4/434 (0%)
Query: 219 EPTTYSQASKSEHWRKAMEEEIKALKRNHTWDLIPSKPNMNIIDCKWIYRVKQKSDGSVD 278
EP+TY++A + W AM++EI A++ HTW++ PN I CKW+Y++K SDG+++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 279 RYKARLVARGFNQQQGIDYTETFSPVVRPATIRTVLSLAIMHDWPIRQLDVKNAFLNGDL 338
RYKARLVA+G+ QQ+GID+ ETFSPV + +++ +L+++ ++++ + QLD+ NAFLNGDL
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 339 QESVFMSQPQGF---QNSSYP-NHVCRLNKAIYGLKQAPRAWHQKFTSSLVHLGFKLSIS 394
E ++M P G+ Q S P N VC L K+IYGLKQA R W KF+ +L+ GF S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 395 DPSMYYRRTSTSFIVILLYVDDILITGSTTSEVNSLILILNQHFLITDLGNLSYFLGMEV 454
D + + + T+T F+ +L+YVDDI+I + + V+ L L F + DLG L YFLG+E+
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 455 KRSMDSIKITQQKYIVDLLHRFGLLHSKPSPSPVKSGSKLYVHDGDPISDPQIFRSLVGA 514
RS I I Q+KY +DLL GLL KPS P+ H G D + +R L+G
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384
Query: 515 LQYLNLTRPDITYAVNQVSKFMKSPSSVHFTAAKRILRYLKGTISDGILLRRSSDFTLTA 574
L YL +TR DI++AVN++S+F ++P H A +IL Y+KGT+ G+ ++ L
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 575 YSDADWAGSPDDKRSTSGLCVFLGPNILSWTSKTQPTVSRSSTEAEYRAMAHTAAEVTWI 634
+SDA + D +RST+G C+FLG +++SW SK Q VS+SS EAEYRA++ E+ W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 635 QNLLGEIGFSLEAP 648
E+ L P
Sbjct: 505 AQFFRELQLPLSKP 518
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 399 bits (1024), Expect = e-126, Method: Compositional matrix adjust.
Identities = 187/434 (43%), Positives = 276/434 (63%), Gaps = 4/434 (0%)
Query: 219 EPTTYSQASKSEHWRKAMEEEIKALKRNHTWDLIPSKPNMNIIDCKWIYRVKQKSDGSVD 278
EP+TY++A + W AM++EI A++ HTW++ PN I CKW+Y++K SDG+++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 279 RYKARLVARGFNQQQGIDYTETFSPVVRPATIRTVLSLAIMHDWPIRQLDVKNAFLNGDL 338
RYKARLVA+G+ QQ+GID+ ETFSPV + +++ +L+++ ++++ + QLD+ NAFLNGDL
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 339 QESVFMSQPQGF---QNSSYP-NHVCRLNKAIYGLKQAPRAWHQKFTSSLVHLGFKLSIS 394
E ++M P G+ Q S P N VC L K+IYGLKQA R W KF+ +L+ GF S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 395 DPSMYYRRTSTSFIVILLYVDDILITGSTTSEVNSLILILNQHFLITDLGNLSYFLGMEV 454
D + + + T+T F+ +L+YVDDI+I + + V+ L L F + DLG L YFLG+E+
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 455 KRSMDSIKITQQKYIVDLLHRFGLLHSKPSPSPVKSGSKLYVHDGDPISDPQIFRSLVGA 514
RS I I Q+KY +DLL GLL KPS P+ H G D + +R L+G
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384
Query: 515 LQYLNLTRPDITYAVNQVSKFMKSPSSVHFTAAKRILRYLKGTISDGILLRRSSDFTLTA 574
L YL +TR DI++AVN++S+F ++P H A +IL Y+KGT+ G+ ++ L
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 575 YSDADWAGSPDDKRSTSGLCVFLGPNILSWTSKTQPTVSRSSTEAEYRAMAHTAAEVTWI 634
+SDA + D +RST+G C+FLG +++SW SK Q VS+SS EAEYRA++ E+ W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 635 QNLLGEIGFSLEAP 648
E+ L P
Sbjct: 505 AQFFRELQLPLSKP 518
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 223 bits (567), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 154/228 (67%), Gaps = 5/228 (2%)
Query: 408 IVILLYVDDILITGSTTSEVNSLILILNQHFLITDLGNLSYFLGMEVKRSMDSIKITQQK 467
+ +LLYVDDIL+TGS+ + +N LI L+ F + DLG + YFLG+++K + ++Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 468 YIVDLLHRFGLLHSKP--SPSPVKSGSKLYVHDGDPISDPQIFRSLVGALQYLNLTRPDI 525
Y +L+ G+L KP +P P+K S + DP FRS+VGALQYL LTRPDI
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSV---STAKYPDPSDFRSIVGALQYLTLTRPDI 117
Query: 526 TYAVNQVSKFMKSPSSVHFTAAKRILRYLKGTISDGILLRRSSDFTLTAYSDADWAGSPD 585
+YAVN V + M P+ F KR+LRY+KGTI G+ + ++S + A+ D+DWAG
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 177
Query: 586 DKRSTSGLCVFLGPNILSWTSKTQPTVSRSSTEAEYRAMAHTAAEVTW 633
+RST+G C FLG NI+SW++K QPTVSRSSTE EYRA+A TAAE+TW
Sbjct: 178 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 125 bits (313), Expect = 7e-33, Method: Composition-based stats.
Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 10/135 (7%)
Query: 183 MVTRSRDGTRRPKILFTSSHTLPPSLLSHITNPNLVEPTTYSQASKSEHWRKAMEEEIKA 242
M+TRS+ G + L P IT EP + A K W +AM+EE+ A
Sbjct: 1 MLTRSKAGINK----------LNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDA 50
Query: 243 LKRNHTWDLIPSKPNMNIIDCKWIYRVKQKSDGSVDRYKARLVARGFNQQQGIDYTETFS 302
L RN TW L+P N NI+ CKW+++ K SDG++DR KARLVA+GF+Q++GI + ET+S
Sbjct: 51 LSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYS 110
Query: 303 PVVRPATIRTVLSLA 317
PVVR ATIRT+L++A
Sbjct: 111 PVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 84.0 bits (206), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 517 YLNLTRPDITYAVNQVSKFMKSPSSVHFTAAKRILRYLKGTISDGILLRRSSDFTLTAYS 576
YL +TRPD+T+AVN++S+F + + A ++L Y+KGT+ G+ +SD L A++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 577 DADWAGSPDDKRSTSGLC 594
D+DWA PD +RS +G C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79