BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0760.1
(835 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 436 e-138
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 436 e-138
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 179 5e-51
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 100 7e-24
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 60 1e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 436 bits (1120), Expect = e-138, Method: Compositional matrix adjust.
Identities = 220/543 (40%), Positives = 335/543 (61%), Gaps = 11/543 (2%)
Query: 252 PNQSVVEDVPEAPSEPPRKILPSRQTRGIPKLT--YEPELSSRVKYPTTQYVSDHRLSES 309
P+ ++ DVPE P R+TR L Y ++S + +Q++S ++S
Sbjct: 18 PSANIQNDVPE-----PSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPL 72
Query: 310 NKSFVNQLSIVYIPNNVQEALSDSKWKAAMNEEMKSLQKNDTWELVDRPEDKNPVGCWWI 369
SF+ ++ P+ EA W AM++E+ +++ TWE+ P +K P+GC W+
Sbjct: 73 YHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 370 YSVKYKADGTIERYKARLVAKGYTQTYGVDYTEIFAPVAKINTVRVLLSLAANLDWPLQQ 429
Y +KY +DGTIERYKARLVAKGYTQ G+D+ E F+PV K+ +V+++L+++A ++ L Q
Sbjct: 133 YKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 430 FDVKNAFLHGELLEEVYMDLPPGCKIPQIHS---QKVCRLKKSLYGLKQSPRAWFGKFTK 486
D+ NAFL+G+L EE+YM LPPG Q S VC LKKS+YGLKQ+ R WF KF+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 487 AMKEFGYHQSNSDHTLFTKKQKGKLTAHIVYVDDMVVTGDDPEERKALQNYLSKEFEMKD 546
+ FG+ QS+SDHT F K +VYVDD+++ ++ L++ L F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 547 LGPLKYFLGIEVSRSSNVIFLSQRKYNLDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIP 606
LGPLKYFLG+E++RS+ I + QRKY LDLL E G+ C+P P++ + S
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 607 VDKGRYQRLVGRLMYLAHTRPNLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGI 666
VD Y+RL+GRLMYL TR ++++A++ +SQF P H AV++IL Y+K G+G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 667 LFTKNSSCRTIDVYTDADWAGEVNGMRSTAGYFTFVGGNLVTWRSKKQNVVARSSAESEF 726
++ + + + V++DA + + RST GY F+G +L++W+SKKQ VV++SSAE+E+
Sbjct: 433 FYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 727 RGMADGICEALWLRLLLDDLGYPSERPIQLYCDNKAACDIAHNPVQHDRTKHVEVDRCFI 786
R ++ E +WL +L P +P L+CDN AA IA N V H+RTKH+E D +
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 787 KEK 789
+E+
Sbjct: 552 RER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 436 bits (1120), Expect = e-138, Method: Compositional matrix adjust.
Identities = 220/543 (40%), Positives = 335/543 (61%), Gaps = 11/543 (2%)
Query: 252 PNQSVVEDVPEAPSEPPRKILPSRQTRGIPKLT--YEPELSSRVKYPTTQYVSDHRLSES 309
P+ ++ DVPE P R+TR L Y ++S + +Q++S ++S
Sbjct: 18 PSANIQNDVPE-----PSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPL 72
Query: 310 NKSFVNQLSIVYIPNNVQEALSDSKWKAAMNEEMKSLQKNDTWELVDRPEDKNPVGCWWI 369
SF+ ++ P+ EA W AM++E+ +++ TWE+ P +K P+GC W+
Sbjct: 73 YHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWV 132
Query: 370 YSVKYKADGTIERYKARLVAKGYTQTYGVDYTEIFAPVAKINTVRVLLSLAANLDWPLQQ 429
Y +KY +DGTIERYKARLVAKGYTQ G+D+ E F+PV K+ +V+++L+++A ++ L Q
Sbjct: 133 YKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 430 FDVKNAFLHGELLEEVYMDLPPGCKIPQIHS---QKVCRLKKSLYGLKQSPRAWFGKFTK 486
D+ NAFL+G+L EE+YM LPPG Q S VC LKKS+YGLKQ+ R WF KF+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 487 AMKEFGYHQSNSDHTLFTKKQKGKLTAHIVYVDDMVVTGDDPEERKALQNYLSKEFEMKD 546
+ FG+ QS+SDHT F K +VYVDD+++ ++ L++ L F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 547 LGPLKYFLGIEVSRSSNVIFLSQRKYNLDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIP 606
LGPLKYFLG+E++RS+ I + QRKY LDLL E G+ C+P P++ + S
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372
Query: 607 VDKGRYQRLVGRLMYLAHTRPNLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGI 666
VD Y+RL+GRLMYL TR ++++A++ +SQF P H AV++IL Y+K G+G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 667 LFTKNSSCRTIDVYTDADWAGEVNGMRSTAGYFTFVGGNLVTWRSKKQNVVARSSAESEF 726
++ + + + V++DA + + RST GY F+G +L++W+SKKQ VV++SSAE+E+
Sbjct: 433 FYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 727 RGMADGICEALWLRLLLDDLGYPSERPIQLYCDNKAACDIAHNPVQHDRTKHVEVDRCFI 786
R ++ E +WL +L P +P L+CDN AA IA N V H+RTKH+E D +
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551
Query: 787 KEK 789
+E+
Sbjct: 552 RER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 179 bits (454), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 134/224 (59%), Gaps = 2/224 (0%)
Query: 515 IVYVDDMVVTGDDPEERKALQNYLSKEFEMKDLGPLKYFLGIEVSRSSNVIFLSQRKYNL 574
++YVDD+++TG L LS F MKDLGP+ YFLGI++ + +FLSQ KY
Sbjct: 4 LLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAE 63
Query: 575 DLLHEVGMSACEPIDTPVEEGLKLSVEPNQIPVDKGRYQRLVGRLMYLAHTRPNLAYALS 634
+L+ GM C+P+ TP+ L SV + P D ++ +VG L YL TRP+++YA++
Sbjct: 64 QILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 635 IVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDVYTDADWAGEVNGMRS 694
IV Q MH P + + R+LRY+K G+ KNS + + D+DWAG + RS
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN-VQAFCDSDWAGCTSTRRS 181
Query: 695 TAGYFTFVGGNLVTWRSKKQNVVARSSAESEFRGMADGICEALW 738
T G+ TF+G N+++W +K+Q V+RSS E+E+R +A E W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 99.8 bits (247), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 67/102 (65%)
Query: 323 PNNVQEALSDSKWKAAMNEEMKSLQKNDTWELVDRPEDKNPVGCWWIYSVKYKADGTIER 382
P +V AL D W AM EE+ +L +N TW LV P ++N +GC W++ K +DGT++R
Sbjct: 28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87
Query: 383 YKARLVAKGYTQTYGVDYTEIFAPVAKINTVRVLLSLAANLD 424
KARLVAKG+ Q G+ + E ++PV + T+R +L++A L+
Sbjct: 88 LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 60.1 bits (144), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 620 MYLAHTRPNLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDV 679
MYL TRP+L +A++ +SQF M AV ++L Y+K G+G+ ++ S + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQ-LKA 59
Query: 680 YTDADWAGEVNGMRSTAGYFTFV 702
+ D+DWA + RS G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82