BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0790.1
(134 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 89 4e-21
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 89 4e-21
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 85 7e-21
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 56 7e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 88.6 bits (218), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Query: 1 MDRVSYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTG 60
+D +Y +G LMY + TR DIS AV+ +S+F P H +AV +L Y+KGTV G
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFGGDT-CQVNGYVDSDYADDLDRRRSTTGYVFRRHSAPVSWRSMLQSTVALSTTEAEY 119
L + Q+ + D+ + D RRST GY ++ +SW+S Q V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 120 MAMAEGVKEALWL 132
A++ E +WL
Sbjct: 492 RALSFATDEMMWL 504
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 88.6 bits (218), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Query: 1 MDRVSYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTG 60
+D +Y +G LMY + TR DIS AV+ +S+F P H +AV +L Y+KGTV G
Sbjct: 373 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 431
Query: 61 LCFGGDT-CQVNGYVDSDYADDLDRRRSTTGYVFRRHSAPVSWRSMLQSTVALSTTEAEY 119
L + Q+ + D+ + D RRST GY ++ +SW+S Q V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 120 MAMAEGVKEALWL 132
A++ E +WL
Sbjct: 492 RALSFATDEMMWL 504
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 84.7 bits (208), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 2 DRVSYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGL 61
D + S VG+L Y + TRPDIS AV++V + M P ++ +K VLRY+KGT+ GL
Sbjct: 96 DPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 154
Query: 62 CFGGDT-CQVNGYVDSDYADDLDRRRSTTGYVFRRHSAPVSWRSMLQSTVALSTTEAEYM 120
++ V + DSD+A RRSTTG+ +SW + Q TV+ S+TE EY
Sbjct: 155 YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYR 214
Query: 121 AMAEGVKEALW 131
A+A E W
Sbjct: 215 ALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 55.8 bits (133), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 14 MYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVNG 72
MY + TRPD++ AV+ +S+F + +AV VL Y+KGTV GL + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 73 YVDSDYADDLDRRRSTTGY 91
+ DSD+A D RRS TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78