BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0800.1
(266 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 214 4e-63
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 214 4e-63
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 89 2e-21
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 66 1e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 214 bits (544), Expect = 4e-63, Method: Composition-based stats.
Identities = 115/271 (42%), Positives = 164/271 (60%), Gaps = 12/271 (4%)
Query: 1 MQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEINGT--RYKARLVVKGYAQK 58
M +E+ ++ TWE+ LP K IGCKWVYK K +S +GT RYKARLV KGY Q+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS---DGTIERYKARLVAKGYTQQ 158
Query: 59 EGIDYNEIFSPVVKQNSIRVLLSIVAHSDLELEQLDVKIAFLHGDLEEEIYMAQPEGYKV 118
EGID+ E FSPV K S++++L+I A + L QLD+ AFL+GDL+EEIYM P GY
Sbjct: 159 EGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 119 EGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLREGDF 174
+ N VC L+KS+YGLKQ+ RQW+ +F ++ GF +S D Y K+ F
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD-HTYFLKITATLF 277
Query: 175 IYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQ 234
+ +L+YVDD++I S + +D+LKSQL F+++D+G K LG+EI RS+ + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQ 335
Query: 235 KGYIERVVSRFGIQNAKAVLTPLTPHFRLSG 265
+ Y ++ G+ K P+ P S
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 214 bits (544), Expect = 4e-63, Method: Composition-based stats.
Identities = 115/271 (42%), Positives = 164/271 (60%), Gaps = 12/271 (4%)
Query: 1 MQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEINGT--RYKARLVVKGYAQK 58
M +E+ ++ TWE+ LP K IGCKWVYK K +S +GT RYKARLV KGY Q+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS---DGTIERYKARLVAKGYTQQ 158
Query: 59 EGIDYNEIFSPVVKQNSIRVLLSIVAHSDLELEQLDVKIAFLHGDLEEEIYMAQPEGYKV 118
EGID+ E FSPV K S++++L+I A + L QLD+ AFL+GDL+EEIYM P GY
Sbjct: 159 EGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 119 EGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLREGDF 174
+ N VC L+KS+YGLKQ+ RQW+ +F ++ GF +S D Y K+ F
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD-HTYFLKITATLF 277
Query: 175 IYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQ 234
+ +L+YVDD++I S + +D+LKSQL F+++D+G K LG+EI RS+ + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQ 335
Query: 235 KGYIERVVSRFGIQNAKAVLTPLTPHFRLSG 265
+ Y ++ G+ K P+ P S
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 89.0 bits (219), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Query: 1 MQEEMESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEINGT--RYKARLVVKGYAQK 58
MQEE+++L +NKTW +VP P ++++GCKWV+K K S +GT R KARLV KG+ Q+
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHS---DGTLDRLKARLVAKGFHQE 100
Query: 59 EGIDYNEIFSPVVKQNSIRVLLSI 82
EGI + E +SPVV+ +IR +L++
Sbjct: 101 EGIYFVETYSPVVRTATIRTILNV 124
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 66.2 bits (160), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 175 IYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQ 234
+YLLLYVDD+L+ S ++ L QLS F MKD+G LG++IK S L+L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 235 KGYIERVVSRFGIQNAKAVLTPL 257
Y E++++ G+ + K + TPL
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPL 81