BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0850.1
(381 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase... 56 2e-09
AT4G09490.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 55 8e-09
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 5e-08
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 51 4e-07
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 49 2e-06
>ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase) |
ChrM:310514-310882 FORWARD LENGTH=122 | 201606
Length = 122
Score = 55.8 bits (133), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 1 MAILINGRPGSTFEVSRGLCQGDSLSPFLLALVMERLSRMLESNNNPNQFDGFPIPNSDI 60
+ +ING P SRGL QGD LSP+L L E LS + + G + N+
Sbjct: 10 LLFIINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSP 69
Query: 61 NIKHLLFADDCIIFGRNTSENIHNFKQILAKFSLTSGQLITNHP--HPIQN 109
I HLLFADD +++ I QI F L S +L +P HP+ N
Sbjct: 70 RINHLLFADDT-----SSARWIPLAAQIWPIFFL-SMRLFQGNPVNHPMSN 114
>AT4G09490.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr4:6015583-6016575 REVERSE
LENGTH=170 | 201606
Length = 170
Score = 55.1 bits (131), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 231 PSTPFLKIYTDTSFTDLSEPAGFGCVIFFSDANFISALADTTRGQNAE---ECECLAIKQ 287
P + I+TD ++ ++ GFG VI + ++AL + +N E +A+
Sbjct: 26 PDLDRVTIFTDAAWKHETKDVGFGWVI--RNCPELTALHYQSAARNVRLPLMAEAIALFL 83
Query: 288 ALMWAINLKISHVHIESDNLNIISFLEDQSYSTQWQFRRHLFEILQLKDRFTESKFSYIP 347
AL +A ++ I+ + + SD+ +I+ + +S ST+ F +F+IL L F + FS++P
Sbjct: 84 ALQYAQSIGITKLSMASDSQQLITAITSESPSTE--FYGIIFDILNLSLGFADVSFSFVP 141
Query: 348 RDYNLIADALAK 359
R N +AD LAK
Sbjct: 142 RSENRVADELAK 153
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Query: 219 KIKEPKHQKWNPPSTPFLKIYTDTSFTDLSEPAGFGCVIFFSDANFISALADTTRG-QNA 277
+ K + KW P ++K D S + +G +I S + +G Q
Sbjct: 21 QTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTI 80
Query: 278 EECECLAIKQALMWAINLKISHVHIESDNLNIISFLEDQSYSTQWQFRRHLFEILQLKDR 337
+E EC A+ A+ A +L V E DN+ + + ++ T + R +L I Q
Sbjct: 81 KEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKE--TNPRLRYYLEFIQQWSKA 138
Query: 338 FTESKFSYIPRDYNLIADALAK 359
FT KF++ R+ N+ D LAK
Sbjct: 139 FTTVKFTFRHREQNVCVDVLAK 160
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 224 KHQKWNPPSTPFLKIYTDTSFTDLSEPAGFGCVIFFSDANFISALADTTRGQ-NAEECEC 282
++ KW+PP LK D S + + +G G ++ S I +G+ EE EC
Sbjct: 101 RNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAEC 160
Query: 283 LAIKQALMWAINLKISHVH----IESDNLNIISFLEDQSYSTQWQFRRHLFEILQ-LKDR 337
L+WAI H E DN I + +S + + Q H + +Q
Sbjct: 161 ----STLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQ---HFLDTIQSWIPS 213
Query: 338 FTESKFSYIPRDYNLIADALAKWG-RKNRQRKIWDALPSFIS 378
F +FS+ R+ N AD LAK ++N Q ++ + P F+S
Sbjct: 214 FESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLS 255
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 70/178 (39%), Gaps = 16/178 (8%)
Query: 185 NDMMEWNHIWNMNIIPRVIQMIQAYTIEPLKVTTKIKEPKHQKWNPPSTPFLKIYTDTSF 244
+D+ EW + IQ + YT+ + +E HQKW P ++K D SF
Sbjct: 29 DDVQEWENA------QEYIQSLNHYTV---REGCNNRESTHQKWEQPPMGWIKCNYDGSF 79
Query: 245 TDLSEPAGFGCVIFFSDANFISALADTTRG--QNAEECECLAIKQALMWAINLKISHVHI 302
++ G +I D F A G NA E E A+ A+ + V
Sbjct: 80 NYRTQQTNSGWLI-RDDKGFYKGAAQAVGGTMNNALESELQALVMAMQHTWSQGYRKVIF 138
Query: 303 ESDNLNIISFL-EDQSYSTQWQFRRHLFEILQLKDRFTESKFSYIPRDYNLIADALAK 359
E D+ + L Q + + + R E RF E FS+ PR N AD LAK
Sbjct: 139 EGDSKQVEELLNRKQMHFGAFNWIR---EAWSWSKRFEEVIFSWTPRTNNQPADMLAK 193