BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0890.1
(888 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 67 4e-11
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 62 1e-09
AT2G13450.1 | Ta11-like non-LTR retrotransposon | Chr2:5598739-5... 61 2e-09
AT3G57587.1 | Ta11-like non-LTR retrotransposon | Chr3:21328263-... 58 2e-08
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 57 3e-08
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 664 DRGAFWDFMRNFNFN---IQEPWCAMGDFNAITTNSEKWG--GSGLNSKAAEQFRNMITD 718
+R + WD + + + PW +GDFN I + +E + S ++ + E + + D
Sbjct: 100 ERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRD 159
Query: 719 CNLIDLGYSGPAYTWANGRGIQHHIRERLDRVLANPEWRLRFPNSIVKHLPRFNSDHAP- 777
+L+DL G YTW+N + + I +LDR + N W FP + P +SDHA
Sbjct: 160 SDLVDLPCRGVLYTWSNHQQ-DNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAAC 218
Query: 778 -IIMNTSKQKTHGNIPYRFEAHWTLHAELGNVVKESWG--LTNGGFVQKLPQLAKKLKGW 834
+I+N S + +++ + + H + + + +W + G F+ L +L K+ K
Sbjct: 219 MVILNNSPPLSKKK-SFKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLKEAKKA 277
Query: 835 SKVRVEKLFSQIK 847
+ + FS I+
Sbjct: 278 CRGLNRRGFSNIQ 290
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 686 MGDFNAITTNSEKWG--GSGLNSKAAEQFRNMITDCNLIDLGYSGPAYTWANGRGIQHHI 743
+GDF+ I S+ + + + + E+F+N + D +L+D+ G YTW+N + I
Sbjct: 224 VGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII 283
Query: 744 RERLDRVLANPEWRLRFPNSIVKHLPRFNSDHAPIIMNTSKQKTHGNIPYRFEAHWTLHA 803
R +LDR +AN +W FP++I SDH+P I+ +R+ + + H
Sbjct: 284 R-KLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHP 342
Query: 804 ELGNVVKESW--GLTNGGFVQKLPQLAKKLKGWSKVRVEKLFSQIKQAEKDLLELQNRSP 861
+ +W + G + L + K K K+ + F I+ K+ L+ S
Sbjct: 343 TFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALD-SLESI 401
Query: 862 SSVPLEEEKRATAKLEHLRRMEEAFW 887
S L + ++EH+ R + F+
Sbjct: 402 QSQLLTNPSDSLFRVEHVARKKWNFF 427
>AT2G13450.1 | Ta11-like non-LTR retrotransposon |
Chr2:5598739-5599923 REVERSE LENGTH=394 | 201606
Length = 394
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 5/211 (2%)
Query: 16 MGKKDESLLKLSNDYARSEDEGRKNLAIKLISGKSMNLNTLKEKLLSAWKPIAKLWLKEF 75
+G++D +L YA E R +L + ++ +S NL+ + L AW ++ +
Sbjct: 14 LGREDPALFIPHEAYAIVESRNRLSLIARPLNPRSQNLHAVISALPRAWGLTNRVHGRVL 73
Query: 76 YENSYIASFELTTDKEKAEDGSPGYIQDELLIWERCEKNKLPTDYVFKKIEFNVQIHGLP 135
+ F+ D P + + +R E N T ++ IE VQ+ G+P
Sbjct: 74 NDTFVQFIFQSEIDLLSVLRREPWLYNNWFVTAQRWEVNL--TFHLLTSIELWVQMRGIP 131
Query: 136 IEYLTEDTVTKIGNMIGQ--TKAIQDGEANKWGKYAQKKVCLDTTKALKTEVLIELPDKR 193
+ Y+ E+T +I + +G+ T D + Y + ++ T L+ + I
Sbjct: 132 LLYVCEETALEIAHELGEIITLDFHDSTTTQIA-YIRVRIRFGITDRLRFFLRIIFDSGE 190
Query: 194 QSTLQVKYEKLTKCCYFCGKLGHLMADCVTR 224
+ + +YE+L + C C ++ H C+ R
Sbjct: 191 TALISFQYERLRRICSSCFRMTHHRNSCLYR 221
>AT3G57587.1 | Ta11-like non-LTR retrotransposon |
Chr3:21328263-21329357 FORWARD LENGTH=364 | 201606
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 115/294 (39%), Gaps = 28/294 (9%)
Query: 11 LMGSLMGKKDESLLKLSNDYARSEDEGRKNLAIKLISGKSMNLNTLKEKLLSAWKPIAKL 70
+ G +G +D +L Y E+ R ++ + ++ + NLN + L W +
Sbjct: 9 IQGLDLGPEDPALFIPHEAYVYVEEFNRLSIIARPLNPRVQNLNAVIAALPRYWGMTVHV 68
Query: 71 WLKEFYENSYIAS-FELTTDKEKAEDGSPGYIQDELLIWERCEKNKLPTDYVFKKIEFNV 129
+ + +Y+ F+ D + + P + + +R E P I+ V
Sbjct: 69 HGR-ILDATYVQFLFQNEVDLQSVQRREPWIFNNWFVATQRWEPA--PALNFVTSIDLWV 125
Query: 130 QIHGLPIEYLTEDTVTKIGNMIGQTKAIQDGEANKWG-KYAQKKVCLDTTKALKTEVLIE 188
QI G+P+ Y+ E+T +I +G+ + +A Y + +V T L+ I
Sbjct: 126 QIRGIPLPYVCEETALEIARDLGEVIMLDHHDATSTQITYIRVRVRFGITDRLRFFQRII 185
Query: 189 LPDKRQSTLQVKYEKLTKCCYFCGKLGHLMADCVT----------RAEIREAI------S 232
T++ +YE+L + C C + H A C RA R+++ S
Sbjct: 186 FDSGEVVTIRFQYERLRRICSSCFRFTHNRAYCPYRPRPHSIARERAVFRDSVHRSSLNS 245
Query: 233 DKWSVETQEKAKKLLLPRFSNA------IKADFKRYVK-SEARTKNIGEEESSR 279
ET A PR ++ ++A + Y + T ++GE ++R
Sbjct: 246 QSQMTETSFPAPVTPPPRIAHPPLNPEELRAAYPYYASVRDTHTLHVGESSTAR 299
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 16 MGKKDESLLKLSNDYARSEDEGRKNLAIKLISGKSMNLNTLKEKLLSAWKPIAKLWLKEF 75
+G+++ L + Y + R +L ++++ ++ ++ +L W ++ +
Sbjct: 14 LGREEPELYIPYHAYVGALASNRLSLLGRILNPQTQSVERAILELPYQWGLGTQVHGRIL 73
Query: 76 YENSYIASFELTTDKEKAEDGSPGYIQDELLIWERCEKNKLPTDYVFKKIEFNVQIHGLP 135
+ + F D +P + + +R E PT+ I+ V I G+P
Sbjct: 74 DDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWED--FPTEDFLTFIDVWVHIRGIP 131
Query: 136 IEYLTEDTVTKIGNMIGQTKAIQ-DGEANKWGKYAQKKVCLDTTKALKTEVLIELPDKRQ 194
+ Y++E TV I + +G+ A+ + E + + KV +D T+ L+ + + +
Sbjct: 132 LPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRER 191
Query: 195 STLQVKYEKLTKCCYFCGKLGHLMADC 221
+ + +YEKL + C C ++ H ++ C
Sbjct: 192 AMIGFEYEKLQRVCTNCCRVNHQVSHC 218