BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000051.1_g0910.1
         (448 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1...    77   1e-14
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1...    66   3e-11

>AT1G43760.1 | DNAse I-like superfamily protein |
           Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
          Length = 626

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 126/280 (45%), Gaps = 30/280 (10%)

Query: 148 LVIGDLNCILHSSEKLGGKEAQC--SNMIKCKQAINRLGLQDIGYSGHPFTWTNKQFKGN 205
           +++GD + I  +S+     +       + + +  +    L DI   G  +TW+N Q   N
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-DDN 280

Query: 206 LIQERLDRALVNHNWLSTFPHSKLTHLPTLGSDHNPIILTTKPNSSLGRKPFKFIRTWMS 265
            I  +LDRA+ N +W S+FP +      +  SDH+P I+  +      +K F++     +
Sbjct: 281 PIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLST 340

Query: 266 HPNCAQFIKTNWA----------SLPNHIQSKLNSLAIRLSKWNKEVFGHLETNIKQLTN 315
           HP     +   W           SL  H+++      +     N++ FG+++   K+  +
Sbjct: 341 HPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKL----LNRQGFGNIQHKTKEALD 396

Query: 316 KIQNIQDPVIF--KETFTQIETLLLQQ--------GSLWKEKSRIANINLGDRNTKYFHA 365
            +++IQ  ++    ++  ++E +  ++         S +++KSRI  +  GD NT++FH 
Sbjct: 397 SLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHK 456

Query: 366 RAATRNRKNQIYSIKKDDNSWTNDEAEISSI---FSNHLL 402
                  KN I  ++ DD+    +  ++  +   +  HLL
Sbjct: 457 VILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLL 496


>AT1G40390.1 | DNAse I-like superfamily protein |
           Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
          Length = 426

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 6/146 (4%)

Query: 136 LASHTPDNQYPWLVIGDLNCILHSSE--KLGGKEAQCSNMIKCKQAINRLGLQDIGYSGH 193
           L++ +P    PWLV+GD N I   +E   L         +   +  +    L D+   G 
Sbjct: 111 LSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVDLPCRGV 170

Query: 194 PFTWTNKQFKGNLIQERLDRALVNHNWLSTFPHSKLTHLPTLGSDHNP--IILTTKPNSS 251
            +TW+N Q + N I  +LDRA+VN  WL+TFP +     P   SDH    +IL   P  S
Sbjct: 171 LYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLS 229

Query: 252 LGRKPFKFIRTWMSHPNCAQFIKTNW 277
             +K FK+     +HP+    I   W
Sbjct: 230 -KKKSFKYFSFLSTHPDFISSILAAW 254


Top