BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0950.1
(140 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 128 1e-37
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 131 5e-36
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 131 5e-36
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 98 4e-27
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 128 bits (322), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
Query: 4 KYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLSDPSVYRRLIGRLLYLTVTRPDIT 63
KYA IL ++G+ +P P+ KL S DPS +R ++G L YLT+TRPDI+
Sbjct: 60 KYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 118
Query: 64 FAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFISADSSLHITRYCDSDWAGCPST 123
+AVN + Q M P+ D RVLRY+KGT+ G++I +S L++ +CDSDWAGC ST
Sbjct: 119 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTST 178
Query: 124 RRSTTGYFTMIGSSPLS 140
RRSTTG+ T +G + +S
Sbjct: 179 RRSTTGFCTFLGCNIIS 195
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 131 bits (329), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 4 KYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLSDPSVYRRLIGRLLYLTVTRPDIT 63
KYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI+
Sbjct: 337 KYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDIS 396
Query: 64 FAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFISADSSLHITRYCDSDWAGCPST 123
FAVN LSQF + P H A ++L Y+KGT+ +G+F S+ + + + + D+ + C T
Sbjct: 397 FAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDT 456
Query: 124 RRSTTGYFTMIGSSPLS 140
RRST GY +G+S +S
Sbjct: 457 RRSTNGYCMFLGTSLIS 473
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 131 bits (329), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 4 KYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLSDPSVYRRLIGRLLYLTVTRPDIT 63
KYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI+
Sbjct: 337 KYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDIS 396
Query: 64 FAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFISADSSLHITRYCDSDWAGCPST 123
FAVN LSQF + P H A ++L Y+KGT+ +G+F S+ + + + + D+ + C T
Sbjct: 397 FAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDT 456
Query: 124 RRSTTGYFTMIGSSPLS 140
RRST GY +G+S +S
Sbjct: 457 RRSTNGYCMFLGTSLIS 473
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 97.8 bits (242), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 53 LYLTVTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFISADSSLHITRY 112
+YLT+TRPD+TFAVN LSQF + A ++VL Y+KGT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 113 CDSDWAGCPSTRRSTTGYFTMI 134
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82