BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g0960.1
(150 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 205 7e-62
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 205 7e-62
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 93 2e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 205 bits (521), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 121/150 (80%), Gaps = 5/150 (3%)
Query: 6 WKEAMAKEISALEENKTWTITSLLPGKRPIGCKWVYKIKFKSDGSIERYKARLVAKGYTQ 65
W AM EI A+E TW I +L P K+PIGCKWVYKIK+ SDG+IERYKARLVAKGYTQ
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 66 IEGLDYTDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLNEKVYMKLPPGFS 125
EG+D+ +TF+PV KL +V+++L+++AI ++LHQLD++NAFL GDL+E++YMKLPPG++
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 126 S-QGES----KVCRLHKFLYGLKQASRQWF 150
+ QG+S VC L K +YGLKQASRQWF
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWF 247
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 205 bits (521), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 121/150 (80%), Gaps = 5/150 (3%)
Query: 6 WKEAMAKEISALEENKTWTITSLLPGKRPIGCKWVYKIKFKSDGSIERYKARLVAKGYTQ 65
W AM EI A+E TW I +L P K+PIGCKWVYKIK+ SDG+IERYKARLVAKGYTQ
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 66 IEGLDYTDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLNEKVYMKLPPGFS 125
EG+D+ +TF+PV KL +V+++L+++AI ++LHQLD++NAFL GDL+E++YMKLPPG++
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 126 S-QGES----KVCRLHKFLYGLKQASRQWF 150
+ QG+S VC L K +YGLKQASRQWF
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWF 247
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 92.8 bits (229), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 62/91 (68%)
Query: 1 MKSSHWKEAMAKEISALEENKTWTITSLLPGKRPIGCKWVYKIKFKSDGSIERYKARLVA 60
+K W +AM +E+ AL NKTW + + +GCKWV+K K SDG+++R KARLVA
Sbjct: 35 LKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVA 94
Query: 61 KGYTQIEGLDYTDTFAPVAKLVTVRVLLSLA 91
KG+ Q EG+ + +T++PV + T+R +L++A
Sbjct: 95 KGFHQEEGIYFVETYSPVVRTATIRTILNVA 125