BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1010.1
(323 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 319 e-101
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 319 e-101
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 228 9e-74
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 97 6e-25
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 319 bits (818), Expect = e-101, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 214/328 (65%), Gaps = 5/328 (1%)
Query: 1 MKLPPGISS-QGES----KVCRLHKSLYGLKQASRQWFSKFSSVLIERGFSQSKSDYSLF 55
MKLPPG ++ QG+S VC L KS+YGLKQASRQWF KFS LI GF QS SD++ F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 56 TFRSHSTQIYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLGRLQYFLGIEVSRSSQ 115
+ + + VLVYVDDIII NND A+ +LK L F L+DLG L+YFLG+E++RS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GIFLCQRKYALHILKDSGLTATRPSEFPMEQKLRLSPTDGTPLSDPSVYRRLIGRLLYLT 175
GI +CQRKYAL +L ++GL +PS PM+ + S G D YRRLIGRL+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 176 VTRPDITFAVNNLSQFMQTPSQVDLDAAHRVLRYLKGTLDKGVFLSADSSLHITGYCDSD 235
+TR DI+FAVN LSQF + P A ++L Y+KGT+ +G+F S+ + + + + D+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 236 WAGCPSTRRSTTGYFTILGSSPLSWKSKKQPTVAKSSAETEYQALAILTCELQWLKYLLL 295
+ C TRRST GY LG+S +SWKSKKQ V+KSSAE EY+AL+ T E+ WL
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 296 DFGIDYSDPMTVYCDNRAALHIVDNPVM 323
+ + S P ++CDN AA+HI N V
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVF 537
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 319 bits (818), Expect = e-101, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 214/328 (65%), Gaps = 5/328 (1%)
Query: 1 MKLPPGISS-QGES----KVCRLHKSLYGLKQASRQWFSKFSSVLIERGFSQSKSDYSLF 55
MKLPPG ++ QG+S VC L KS+YGLKQASRQWF KFS LI GF QS SD++ F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 56 TFRSHSTQIYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLGRLQYFLGIEVSRSSQ 115
+ + + VLVYVDDIII NND A+ +LK L F L+DLG L+YFLG+E++RS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GIFLCQRKYALHILKDSGLTATRPSEFPMEQKLRLSPTDGTPLSDPSVYRRLIGRLLYLT 175
GI +CQRKYAL +L ++GL +PS PM+ + S G D YRRLIGRL+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 176 VTRPDITFAVNNLSQFMQTPSQVDLDAAHRVLRYLKGTLDKGVFLSADSSLHITGYCDSD 235
+TR DI+FAVN LSQF + P A ++L Y+KGT+ +G+F S+ + + + + D+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 236 WAGCPSTRRSTTGYFTILGSSPLSWKSKKQPTVAKSSAETEYQALAILTCELQWLKYLLL 295
+ C TRRST GY LG+S +SWKSKKQ V+KSSAE EY+AL+ T E+ WL
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 296 DFGIDYSDPMTVYCDNRAALHIVDNPVM 323
+ + S P ++CDN AA+HI N V
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVF 537
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 228 bits (580), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 108/226 (47%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 64 IYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLGRLQYFLGIEVSRSSQGIFLCQRK 123
+Y+L+YVDDI++TG+++ ++ L L+ FS+KDLG + YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 124 YALHILKDSGLTATRPSEFPMEQKLRLSPTDGTPLSDPSVYRRLIGRLLYLTVTRPDITF 183
YA IL ++G+ +P P+ KL S DPS +R ++G L YLT+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 184 AVNNLSQFMQTPSQVDLDAAHRVLRYLKGTLDKGVFLSADSSLHITGYCDSDWAGCPSTR 243
AVN + Q M P+ D D RVLRY+KGT+ G+++ +S L++ +CDSDWAGC STR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 244 RSTTGYFTILGSSPLSWKSKKQPTVAKSSAETEYQALAILTCELQW 289
RSTTG+ T LG + +SW +K+QPTV++SS ETEY+ALA+ EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 97.4 bits (241), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 172 LYLTVTRPDITFAVNNLSQFMQTPSQVDLDAAHRVLRYLKGTLDKGVFLSADSSLHITGY 231
+YLT+TRPD+TFAVN LSQF + A ++VL Y+KGT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 232 CDSDWAGCPSTRRSTTGYFTIL 253
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82