BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1230.1
(297 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G66580.1 | senescence associated gene 24 | Chr1:24839208-2484... 101 1e-25
AT1G14320.1 | Ribosomal protein L16p/L10e family protein | Chr1:... 100 3e-25
AT1G26910.1 | Ribosomal protein L16p/L10e family protein | Chr1:... 100 3e-25
>AT1G66580.1 | senescence associated gene 24 |
Chr1:24839208-24840439 FORWARD LENGTH=221 | 201606
Length = 221
Score = 101 bits (252), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 49/61 (80%)
Query: 70 RPARCYRQIKNKPYPKPWYCRGVPDPKIRIYDVGMKRKGVDEFSCPVHLIRSLKEKVKKE 129
RPARCYRQIK KPYPK YCRGVPDPKIRIYDVGMKRKGVDEF VHL+ KE V E
Sbjct: 4 RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSE 63
Query: 130 S 130
+
Sbjct: 64 A 64
>AT1G14320.1 | Ribosomal protein L16p/L10e family protein |
Chr1:4888270-4889408 FORWARD LENGTH=220 | 201606
Length = 220
Score = 100 bits (250), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 49/61 (80%)
Query: 70 RPARCYRQIKNKPYPKPWYCRGVPDPKIRIYDVGMKRKGVDEFSCPVHLIRSLKEKVKKE 129
RPARCYRQIK KPYPK YCRGVPDPKIRIYDVGMKRKGVDEF VHL+ KE V E
Sbjct: 4 RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSE 63
Query: 130 S 130
+
Sbjct: 64 A 64
>AT1G26910.1 | Ribosomal protein L16p/L10e family protein |
Chr1:9321709-9322813 FORWARD LENGTH=221 | 201606
Length = 221
Score = 100 bits (250), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 49/61 (80%)
Query: 70 RPARCYRQIKNKPYPKPWYCRGVPDPKIRIYDVGMKRKGVDEFSCPVHLIRSLKEKVKKE 129
RPARCYRQIK KPYPK YCRGVPDPKIRIYDVGMKRKGVDEF VHL+ KE V E
Sbjct: 4 RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSE 63
Query: 130 S 130
+
Sbjct: 64 A 64