BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1300.1
(891 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 352 e-106
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 352 e-106
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 124 9e-32
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 97 9e-23
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 2e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 352 bits (902), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 288/475 (60%), Gaps = 11/475 (2%)
Query: 379 EPQTFIEAMTTPEAPFWKEVVNSEIESIMQNHTWEIVDLPAGCKPLGCKWIFKKKLKPDG 438
EP T+ EA E W ++ EI ++ HTWEI LP KP+GCKW++K K DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 439 SIEKYKARLVAQGFRQKEGLDYFDTYPPVSRITSIRVLVAIASLYNLEIHQMDVKTAFLN 498
+IE+YKARLVA+G+ Q+EG+D+ +T+ PV ++TS+++++AI+++YN +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 499 GNLDEEIYMKQPEGFVVPGQEK----KVCRLVKSLYGLKQAPKQWHLKFDNTLLSNGFKI 554
G+LDEEIYMK P G+ + VC L KS+YGLKQA +QW LKF TL+ GF
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 555 NECEKCVYTKSITKGCVILCLYVDDMLIIGNNLDVINTTKKMLSKNFDMKDLGKAKVILG 614
+ + + K + + +YVDD++I NN ++ K L F ++DLG K LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 615 IKLTKTAEGIGLSQSHYVEKILEKFSKNDDKIARTPLDPSIHLKKNITKTGVRQLEYSRI 674
+++ ++A GI + Q Y +L++ K + P+DPS+ + V Y R+
Sbjct: 322 LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRL 381
Query: 675 IGSLMYLMNCTRPDLALSVSKLSRFTSNPDETHWIAITRLLRYLRHTKEYGLHYTKYPEV 734
IG LMYL TR D++ +V+KLS+F+ P H A+ ++L Y++ T GL Y+ E+
Sbjct: 382 IGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440
Query: 735 -LEGYCDANWISDTDDTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAAEE 793
L+ + DA++ S D +ST+GY LG + ISWKS KQ +++S+ ++E+ AL A +E
Sbjct: 441 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500
Query: 794 AEWLRQFLEDIPVWPKPVPAINIHCDNQAAIAQAHSKMYNGKSRHIRRRHNTVKQ 848
WL QF ++ + P P + + CDN AAI A + +++ +++HI ++V++
Sbjct: 501 MMWLAQFFRELQL-PLSKPTL-LFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 352 bits (902), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 288/475 (60%), Gaps = 11/475 (2%)
Query: 379 EPQTFIEAMTTPEAPFWKEVVNSEIESIMQNHTWEIVDLPAGCKPLGCKWIFKKKLKPDG 438
EP T+ EA E W ++ EI ++ HTWEI LP KP+GCKW++K K DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 439 SIEKYKARLVAQGFRQKEGLDYFDTYPPVSRITSIRVLVAIASLYNLEIHQMDVKTAFLN 498
+IE+YKARLVA+G+ Q+EG+D+ +T+ PV ++TS+++++AI+++YN +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 499 GNLDEEIYMKQPEGFVVPGQEK----KVCRLVKSLYGLKQAPKQWHLKFDNTLLSNGFKI 554
G+LDEEIYMK P G+ + VC L KS+YGLKQA +QW LKF TL+ GF
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 555 NECEKCVYTKSITKGCVILCLYVDDMLIIGNNLDVINTTKKMLSKNFDMKDLGKAKVILG 614
+ + + K + + +YVDD++I NN ++ K L F ++DLG K LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 615 IKLTKTAEGIGLSQSHYVEKILEKFSKNDDKIARTPLDPSIHLKKNITKTGVRQLEYSRI 674
+++ ++A GI + Q Y +L++ K + P+DPS+ + V Y R+
Sbjct: 322 LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRL 381
Query: 675 IGSLMYLMNCTRPDLALSVSKLSRFTSNPDETHWIAITRLLRYLRHTKEYGLHYTKYPEV 734
IG LMYL TR D++ +V+KLS+F+ P H A+ ++L Y++ T GL Y+ E+
Sbjct: 382 IGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440
Query: 735 -LEGYCDANWISDTDDTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAAEE 793
L+ + DA++ S D +ST+GY LG + ISWKS KQ +++S+ ++E+ AL A +E
Sbjct: 441 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500
Query: 794 AEWLRQFLEDIPVWPKPVPAINIHCDNQAAIAQAHSKMYNGKSRHIRRRHNTVKQ 848
WL QF ++ + P P + + CDN AAI A + +++ +++HI ++V++
Sbjct: 501 MMWLAQFFRELQL-PLSKPTL-LFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 124 bits (312), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 125/228 (54%), Gaps = 9/228 (3%)
Query: 573 LCLYVDDMLIIGNNLDVINTTKKMLSKNFDMKDLGKAKVILGIKLTKTAEGIGLSQSHYV 632
L LYVDD+L+ G++ ++N LS F MKDLG LGI++ G+ LSQ+ Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 633 EKILEKFSKNDDKIARTPLDPSIHLKKNITKTGVRQ---LEYSRIIGSLMYLMNCTRPDL 689
E+IL D K TPL LK N + + + ++ I+G+L YL TRPD+
Sbjct: 63 EQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDI 117
Query: 690 ALSVSKLSRFTSNPDETHWIAITRLLRYLRHTKEYGLHYTKYPEV-LEGYCDANWISDTD 748
+ +V+ + + P + + R+LRY++ T +GL+ K ++ ++ +CD++W T
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 177
Query: 749 DTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAAEEAEW 796
+ST+G+ LG ISW + +Q ++RS+ ++E+ AL A E W
Sbjct: 178 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 96.7 bits (239), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
Query: 372 VTFMIEGEPQTFIEAMTTPEAPFWKEVVNSEIESIMQNHTWEIVDLPAGCKPLGCKWIFK 431
+T I+ EP++ I A+ P W + + E++++ +N TW +V P LGCKW+FK
Sbjct: 20 ITTTIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFK 76
Query: 432 KKLKPDGSIEKYKARLVAQGFRQKEGLDYFDTYPPVSRITSIRVLVAIASLYNLEIHQ 489
KL DG++++ KARLVA+GF Q+EG+ + +TY PV R +IR ++ +A LE+ Q
Sbjct: 77 TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ--QLEVGQ 132
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 188 NRTLKEMMNAMLLSSGLPQNLWGEAILTANHLLNKLPHRKTG-NIPYELWKERKPSFKYT 246
NRT+ E + +ML GLP+ +A TA H++NK P ++P E+W + P++ Y
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 247 KVWGCLAKV 255
+ +GC+A +
Sbjct: 62 RRFGCVAYI 70