BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1310.1
(400 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00980.1 | zinc knuckle (CCHC-type) family protein | Chr4:422... 104 3e-24
>AT4G00980.1 | zinc knuckle (CCHC-type) family protein |
Chr4:422732-424580 REVERSE LENGTH=488 | 201606
Length = 488
Score = 104 bits (260), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 37/310 (11%)
Query: 6 ETVRVNASSSNHAEKPEKFKGIDFKRWQQKMLFYLTTLGLVKYLSEEKPILNE----DGD 61
E V ++S K +F G + W +M +L L L LSE P + + +
Sbjct: 180 EAVDKDSSHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETN 239
Query: 62 IQNVSAVEA----WKHSDFLCKNYILNSLDDSLYNIYYI-IETSKELWNTLINKYKTETA 116
+ ++ +A W D+LC +++NSL D LY Y + +KELW+ L Y+ + +
Sbjct: 240 PREITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDES 299
Query: 117 SMKKFIVGRFLDYKMTDSKPVMLQVQELQMLLQELKAENMITNEAFQVRAMIEKLPLGWK 176
K+ V ++++++M + +P++ QVQ + + + M +EAF V +I K P W+
Sbjct: 300 KSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWR 359
Query: 177 DFKNYLRHKNKDMGLEDLILKLRIEEDSRSAERRNEKISNVNVVETKPNKVNKRKRSTKS 236
F L + + + L+ +++ EE+ RN V +P + + T S
Sbjct: 360 GFCTRLMEEEY-LPVWMLMERVKAEEEL----LRN----GAKGVTYRPATGSSQMERTPS 410
Query: 237 NGKAKRKKNANG---------------CFACGKLGHFAKDCWSSK----PGSKPNKVKNQ 277
G R + G C CG+ GH AK CW SK K N++ +
Sbjct: 411 LGTTHRGSQSVGWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSKSDERASGKSNRINSS 470
Query: 278 TSLIEDSELQ 287
+ +SE Q
Sbjct: 471 VAAPVESETQ 480