BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1350.1
(883 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 407 e-126
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 407 e-126
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 174 5e-49
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 102 7e-25
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 64 5e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 407 bits (1045), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 325/546 (59%), Gaps = 41/546 (7%)
Query: 324 PNQSVVEDVPEAPSEPPRKILPSRQTRGIPKPTYEPE-----LSSRVKYPMSHYVSDHRL 378
P+ ++ DVPE P R+TR KP Y + ++S + +S ++S ++
Sbjct: 18 PSANIQNDVPE-----PSVHTSHRRTR---KPAYLQDYYCHSVASLTIHDISQFLSYEKV 69
Query: 379 SESNKSFVNQLSTIYIPNNVQEALSDSKWKATMNEEMKSLQKNDTWELVDRPEDKNPVGC 438
S SF+ ++ P+ EA W M++E+ +++ TWE+ P +K P+GC
Sbjct: 70 SPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 129
Query: 439 RWIYSVKYKADGTIERYKARLVAKGYTQTYGVDYTETFAPVAKINTVRVLLSLAANLDWP 498
+W+Y +KY +DGTIERYKARLVAKGYTQ G+D+ ETF+PV K+ +V+++L+++A ++
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 499 LQQFDVKNAFLHGELLEEVYMDLPPGCKIPQIHS----------------QKAVKE---- 538
L Q D+ NAFL+G+L EE+YM LPPG Q S ++A ++
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 539 -------FGYHQRNSDHTLFTKRQKGKLTALIVYVDDMVVSRDDPEERKALQNYLSKEFE 591
FG+ Q +SDHT F K ++VYVDD+++ ++ L++ L F+
Sbjct: 250 FSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 309
Query: 592 MKDLGPLKYFLGIEVSRSSNGIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPN 651
++DLGPLKYFLG+E++RS+ GI + QRKY LDLL E G+ C+P P++ + S
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 652 QILVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFIHNPGEKHMNAVLRILRYLKAAPG 711
VD Y+RL+GRLMYL TR D+++A++ +SQF P H AV++IL Y+K G
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 712 KGILFTKNLSCRTIDVYTDADWASEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 771
+G+ ++ + + V++DA + S + RRST GY F+G +L++W+SKKQ VV++SSAE
Sbjct: 430 QGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 772 SEFRGMTDGICEALWLRLLLDDLGYPFERPIQLYCDNKAACDIAHNPVQHDRTKHVEVDR 831
+E+R ++ E +WL +L P +P L+CDN AA IA N V H+RTKH+E D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 832 CFIKEK 837
++E+
Sbjct: 549 HSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 407 bits (1045), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 325/546 (59%), Gaps = 41/546 (7%)
Query: 324 PNQSVVEDVPEAPSEPPRKILPSRQTRGIPKPTYEPE-----LSSRVKYPMSHYVSDHRL 378
P+ ++ DVPE P R+TR KP Y + ++S + +S ++S ++
Sbjct: 18 PSANIQNDVPE-----PSVHTSHRRTR---KPAYLQDYYCHSVASLTIHDISQFLSYEKV 69
Query: 379 SESNKSFVNQLSTIYIPNNVQEALSDSKWKATMNEEMKSLQKNDTWELVDRPEDKNPVGC 438
S SF+ ++ P+ EA W M++E+ +++ TWE+ P +K P+GC
Sbjct: 70 SPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 129
Query: 439 RWIYSVKYKADGTIERYKARLVAKGYTQTYGVDYTETFAPVAKINTVRVLLSLAANLDWP 498
+W+Y +KY +DGTIERYKARLVAKGYTQ G+D+ ETF+PV K+ +V+++L+++A ++
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 499 LQQFDVKNAFLHGELLEEVYMDLPPGCKIPQIHS----------------QKAVKE---- 538
L Q D+ NAFL+G+L EE+YM LPPG Q S ++A ++
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 539 -------FGYHQRNSDHTLFTKRQKGKLTALIVYVDDMVVSRDDPEERKALQNYLSKEFE 591
FG+ Q +SDHT F K ++VYVDD+++ ++ L++ L F+
Sbjct: 250 FSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 309
Query: 592 MKDLGPLKYFLGIEVSRSSNGIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPN 651
++DLGPLKYFLG+E++RS+ GI + QRKY LDLL E G+ C+P P++ + S
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 652 QILVDKGRYQRLVGRLMYLAHTRPDLAYALSIVSQFIHNPGEKHMNAVLRILRYLKAAPG 711
VD Y+RL+GRLMYL TR D+++A++ +SQF P H AV++IL Y+K G
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 712 KGILFTKNLSCRTIDVYTDADWASEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 771
+G+ ++ + + V++DA + S + RRST GY F+G +L++W+SKKQ VV++SSAE
Sbjct: 430 QGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 772 SEFRGMTDGICEALWLRLLLDDLGYPFERPIQLYCDNKAACDIAHNPVQHDRTKHVEVDR 831
+E+R ++ E +WL +L P +P L+CDN AA IA N V H+RTKH+E D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 832 CFIKEK 837
++E+
Sbjct: 549 HSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 174 bits (440), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 133/225 (59%), Gaps = 2/225 (0%)
Query: 562 LIVYVDDMVVSRDDPEERKALQNYLSKEFEMKDLGPLKYFLGIEVSRSSNGIFLSQRKYT 621
L++YVDD++++ L LS F MKDLGP+ YFLGI++ +G+FLSQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 622 LDLLHEVGMSACEPIDTPVEEGLKLSVEPNQILVDKGRYQRLVGRLMYLAHTRPDLAYAL 681
+L+ GM C+P+ TP+ L SV + D ++ +VG L YL TRPD++YA+
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 682 SIVSQFIHNPGEKHMNAVLRILRYLKAAPGKGILFTKNLSCRTIDVYTDADWASEVNGRR 741
+IV Q +H P + + R+LRY+K G+ KN S + + D+DWA + RR
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKN-SKLNVQAFCDSDWAGCTSTRR 180
Query: 742 STAGYFTFVGGNLVTWRSKKQNVVARSSAESEFRGMTDGICEALW 786
ST G+ TF+G N+++W +K+Q V+RSS E+E+R + E W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 102 bits (255), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 68/102 (66%)
Query: 395 PNNVQEALSDSKWKATMNEEMKSLQKNDTWELVDRPEDKNPVGCRWIYSVKYKADGTIER 454
P +V AL D W M EE+ +L +N TW LV P ++N +GC+W++ K +DGT++R
Sbjct: 28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87
Query: 455 YKARLVAKGYTQTYGVDYTETFAPVAKINTVRVLLSLAANLD 496
KARLVAKG+ Q G+ + ET++PV + T+R +L++A L+
Sbjct: 88 LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 63.9 bits (154), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 668 MYLAHTRPDLAYALSIVSQFIHNPGEKHMNAVLRILRYLKAAPGKGILFTKNLSCRTIDV 727
MYL TRPDL +A++ +SQF M AV ++L Y+K G+G+ ++ S +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSAT-SDLQLKA 59
Query: 728 YTDADWASEVNGRRSTAGYFTFV 750
+ D+DWAS + RRS G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82