BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1420.1
(196 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 72 2e-14
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 72 2e-14
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 42 9e-05
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 71.6 bits (174), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 2 GIKHILRYLRGTTDMGLFYSKNSSDGSQVTGYTDAGYLSDPHKGVSQTGYVFTSGGTAFS 61
+ IL Y++GT GLFYS + QV ++DA + S S GY G + S
Sbjct: 416 AVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLIS 473
Query: 62 WRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIRLSCDLPGITKSPTVIYEDNAA 121
W+S KQ + + SS +E AL AT E +WL ++L PT+++ DN A
Sbjct: 474 WKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP------LSKPTLLFCDNTA 527
Query: 122 CIAQIREGYIKGDRTKHI 139
I I + +RTKHI
Sbjct: 528 AI-HIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 71.6 bits (174), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 2 GIKHILRYLRGTTDMGLFYSKNSSDGSQVTGYTDAGYLSDPHKGVSQTGYVFTSGGTAFS 61
+ IL Y++GT GLFYS + QV ++DA + S S GY G + S
Sbjct: 416 AVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLIS 473
Query: 62 WRSSKQSMPATSSNHSEIIALHEATRECVWLRSIISHIRLSCDLPGITKSPTVIYEDNAA 121
W+S KQ + + SS +E AL AT E +WL ++L PT+++ DN A
Sbjct: 474 WKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLP------LSKPTLLFCDNTA 527
Query: 122 CIAQIREGYIKGDRTKHI 139
I I + +RTKHI
Sbjct: 528 AI-HIATNAVFHERTKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 3 IKHILRYLRGTTDMGLFYSKNSSDGSQVTGYTDAGYLSDPHKGVSQTGYVFTSGGTAFSW 62
+K +LRY++GT GL+ KNS Q + D+ + S TG+ G SW
Sbjct: 139 LKRVLRYVKGTIFHGLYIHKNSKLNVQ--AFCDSDWAGCTSTRRSTTGFCTFLGCNIISW 196
Query: 63 RSSKQSMPATSSNHSEIIALHEATRECVW 91
+ +Q + SS +E AL E W
Sbjct: 197 SAKRQPTVSRSSTETEYRALALTAAELTW 225