BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1430.1
(451 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 3e-36
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 3e-36
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 72 1e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (359), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 137/244 (56%), Gaps = 12/244 (4%)
Query: 213 EPRTIEECRQRSDWSKWKDAIQAELDSLNKRRVFGPVVLTSKDVNPVGFKWVFVRKRNEN 272
EP T E + ++ W A+ E+ ++ + L + P+G KWV+ K N +
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTL-PPNKKPIGCKWVYKIKYNSD 140
Query: 273 KEIIRYKARLVAQGFLQKPGIDYEETYSPVMDAITFRYLISLAAQEELDMHLLDVGTAYL 332
I RYKARLVA+G+ Q+ GID+ ET+SPV + + +++++A +H LD+ A+L
Sbjct: 141 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 333 YGNLDTDIYMKVPEGFKLPEGK---PRVMYSLKLNRALYGLKQSGRMWYNRLSEYLTKEG 389
G+LD +IYMK+P G+ +G P + LK +++YGLKQ+ R W+ + S L G
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 390 YVNNPICPCVFIKKSYTRFAIIAIYVDDINLIGTVED--VSKAAEYLKKEFEMKDLGKTK 447
+V + F+K + T F + +YVDDI +I + D V + LK F+++DLG K
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 448 FCIG 451
+ +G
Sbjct: 318 YFLG 321
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (359), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 137/244 (56%), Gaps = 12/244 (4%)
Query: 213 EPRTIEECRQRSDWSKWKDAIQAELDSLNKRRVFGPVVLTSKDVNPVGFKWVFVRKRNEN 272
EP T E + ++ W A+ E+ ++ + L + P+G KWV+ K N +
Sbjct: 85 EPSTYNEAK---EFLVWCGAMDDEIGAMETTHTWEICTL-PPNKKPIGCKWVYKIKYNSD 140
Query: 273 KEIIRYKARLVAQGFLQKPGIDYEETYSPVMDAITFRYLISLAAQEELDMHLLDVGTAYL 332
I RYKARLVA+G+ Q+ GID+ ET+SPV + + +++++A +H LD+ A+L
Sbjct: 141 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 333 YGNLDTDIYMKVPEGFKLPEGK---PRVMYSLKLNRALYGLKQSGRMWYNRLSEYLTKEG 389
G+LD +IYMK+P G+ +G P + LK +++YGLKQ+ R W+ + S L G
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 390 YVNNPICPCVFIKKSYTRFAIIAIYVDDINLIGTVED--VSKAAEYLKKEFEMKDLGKTK 447
+V + F+K + T F + +YVDDI +I + D V + LK F+++DLG K
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 448 FCIG 451
+ +G
Sbjct: 318 YFLG 321
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 72.4 bits (176), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 13/126 (10%)
Query: 197 FSFTVATSILKENDDYEPRTIEECRQRSDWSKWKDAIQAELDSLNKRRVFGPVVLTSKDV 256
+S T+ T+I KE P+++ + W + A+Q ELD+L++ + + +L V
Sbjct: 16 YSLTITTTIKKE-----PKSVIFALKDPGWCQ---AMQEELDALSRNKTW---ILVPPPV 64
Query: 257 NP--VGFKWVFVRKRNENKEIIRYKARLVAQGFLQKPGIDYEETYSPVMDAITFRYLISL 314
N +G KWVF K + + + R KARLVA+GF Q+ GI + ETYSPV+ T R ++++
Sbjct: 65 NQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
Query: 315 AAQEEL 320
A Q E+
Sbjct: 125 AQQLEV 130