BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1490.1
(719 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 147 5e-37
ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase... 76 2e-16
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1... 75 4e-14
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 47 4e-05
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 147 bits (372), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 179/373 (47%), Gaps = 36/373 (9%)
Query: 106 LVDLGFNGPAYTWSNNRGNGLLIRERLDRVLSSVSWLDMYLNA-GVFHLPRYNCDHCPIL 164
LVD+ G YTWSN++ + +IR +LDR +++ W + +A VF L + DH P +
Sbjct: 261 LVDIPSRGVHYTWSNHQDDNPIIR-KLDRAIANGDWFSSFPSAIAVFELSGVS-DHSPCI 318
Query: 165 LKTEVHGTTTRGKCKFEAFWLKHQDYKEQLNLHWMQADP------SINHRLKGVKNQLNL 218
+ E ++ ++ +F H + L + W + P S+ LK K L
Sbjct: 319 IILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKL 378
Query: 219 WGKECFGNLDRRISILRFRLKNVQAQPITDWTLMQESRIQEDLIHLEELQRTK------- 271
++ FGN+ + L+++Q+Q +T+ + L +E + R K
Sbjct: 379 LNRQGFGNIQHKTKEALDSLESIQSQLLTN--------PSDSLFRVEHVARKKWNFFAAA 430
Query: 272 ----LEQRTRQFWALNGDRNTKAFHVAVANKRRKNHIQFLMKPDSSRATTETEISEILIA 327
Q++R W +GD NT+ FH + + KN I+FL D R T++ E+++A
Sbjct: 431 LESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVA 490
Query: 328 HFQNLFTADR-VNTPPSDVLSNIKQIPA----DSLHA-ISMVPTAEEIKQVVFNMGALKS 381
++ +L +D + TP D + IK I D+L + +S +P+ +EI VF M K+
Sbjct: 491 YYTHLLGSDSDILTP--DSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKA 548
Query: 382 PGPDGLPCLFYQNGWDIVGPDIIKFMQKSFSEGFFPREINETNLVLIPKTEHPSKAADYR 441
PGPD F+ W +V I +++ F G + N T + LIPK + + +R
Sbjct: 549 PGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFR 608
Query: 442 PIALCNVLYKFIT 454
P++ C V+YK IT
Sbjct: 609 PVSCCTVVYKIIT 621
>ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase) |
ChrM:310514-310882 FORWARD LENGTH=122 | 201606
Length = 122
Score = 76.3 bits (186), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 553 MINGKKRGNFTTTRGLRQGCPLSPYLFIMVSQTLSTLMEKYERESVFDGFRVNRKAPRVS 612
+ING +G T +RGLRQG PLSPYLFI+ ++ LS L + + + G RV+ +PR++
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 613 HLLFADD 619
HLLFADD
Sbjct: 73 HLLFADD 79
>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
Length = 376
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 457 IANRLRPNLDSCIGWYQNAFVPNRQIIDNIIIVQESMHSMKLSKAKEGAFMLKLDMAKAY 516
+ RL+P + + IG Q +F+P R DNI+ VQE++HSM+ K +G +LKLD+ KAY
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 517 DRVDWGFLKLVLRQMGIPDSLLKLI 541
DR+ W +L+ L G P+ L I
Sbjct: 61 DRIRWDYLEDTLISAGFPEVWLPEI 85
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 15/185 (8%)
Query: 106 LVDLGFNGPAYTWSNNRGNGLLIRERLDRVLSSVSWLDMYLNAGVFHLPRYNCDH--CPI 163
LVDL G YTWSN++ + ++R +LDR + + WL + A P + DH C +
Sbjct: 162 LVDLPCRGVLYTWSNHQQDNPILR-KLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMV 220
Query: 164 LLKTEVHGTTTRGKCKFEAFWLKHQDYKEQLNLHWMQADPSINHRLKGVKNQLNLWGKEC 223
+L + + K+ +F H D+ + W Q + ++ + + L K C
Sbjct: 221 ILNNSP-PLSKKKSFKYFSFLSTHPDFISSILAAW-QKEIAVGSFMFSLGELLKEAKKAC 278
Query: 224 FGNLDRRISILRFRLKNVQAQPI---TDWTLMQESRIQEDLIHLEELQRTKLEQRTRQFW 280
G L+RR N+QAQ + +D+ E +++ + +Q++R W
Sbjct: 279 RG-LNRR------GFSNIQAQLMSNPSDFLFRAEHVARKNWNFFAAALESFYKQKSRIKW 331
Query: 281 ALNGD 285
GD
Sbjct: 332 LKEGD 336