BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1500.1
(342 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 65 2e-11
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 56 2e-08
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 53 2e-07
AT5G18636.1 | Ta11-like non-LTR retrotransposon | Chr5:6211268-6... 51 6e-07
AT5G25200.1 | Ta11-like non-LTR retrotransposon | Chr5:8716766-8... 51 8e-07
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 8 LDLLKRRLTGIWNLPFPYEFSDITTNTFLVKFGTTGEVDYIISKAPWIIKEDIFLVERCI 67
+ +L R+L +W D+ F+++F E ++ PW + + LV+
Sbjct: 92 ISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWS 151
Query: 68 KEKSPLEHEFDKAWFTVQFHDLPYHMLNDKTINLLAKGIGNFVPATAEEAATWKS-FGKV 126
PL + V+ ++PY+ + + +A+G+G + K F +V
Sbjct: 152 SRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARV 211
Query: 127 KIEVSICKPLPKSVYLQIMGGKTIQVFLRFERLGRFCLFCGFLGHTMGFCPRRL 180
IEV++ KPL +V + + F+ +E L + C CG GH + CPR +
Sbjct: 212 CIEVNLAKPLKGTVLIN-----GDRYFVAYEGLSKICSSCGIYGHLVHSCPRNV 260
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
Query: 35 FLVKFGTTGEVDYIISKAPWIIKEDIFLVERCIKEKSPLEHEFDKAWFTVQFHDLPYHML 94
F F ++ ++ + PW + + L++R + + PL F F VQ +P+ L
Sbjct: 173 FHFIFTLEESLETVLRRGPWAFNDWMILLQRW-EPQIPL---FPFIPFWVQIRGIPFQFL 228
Query: 95 NDKTINLLAKGIGNFVPATAE-EAATWKSFGKVKIEVSICKPLPKSVYLQIMGGKTIQVF 153
N + + + +G + E F +V + I PL + Q G +
Sbjct: 229 NRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLR 288
Query: 154 LRFERLGRFCLFCGFLGHTMGFC 176
R+ERL FC CG L H G C
Sbjct: 289 FRYERLRGFCEVCGMLTHDFGAC 311
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 35 FLVKFGTTGEVDYIISKAPWIIKEDIFLVERCIKEKSPLEH--EFDKAWFTVQFHDLPYH 92
F V+F + ++ + +APW+ E ++R E P E F W ++ LPY
Sbjct: 78 FQVRFRSEIDLLNGLRRAPWVFNEWFIALQRW--EDFPTEDFLTFIDVWVHIRGIPLPY- 134
Query: 93 MLNDKTINLLAKGIGNFVPAT-AEEAATWKSFGKVKIEVSICKPLPKSVYLQIMGGKTIQ 151
++++T+ ++A +G V EE + +F +VK+ + +PL ++ +
Sbjct: 135 -VSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAM 193
Query: 152 VFLRFERLGRFCLFCGFLGHTMGFCP 177
+ +E+L R C C + H + CP
Sbjct: 194 IGFEYEKLQRVCTNCCRVNHQVSHCP 219
>AT5G18636.1 | Ta11-like non-LTR retrotransposon |
Chr5:6211268-6212371 FORWARD LENGTH=367 | 201606
Length = 367
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 37 VKFGTTGEVDYII--SKAPWIIKEDIFLVERCIKEKSPLEHEFDKAWFTVQFHDLPYHML 94
V+F E+D ++ + PW+ + V + +P + VQ +P +
Sbjct: 78 VQFVFANEIDLMMVQRREPWLFNN--WFVAATRWQVAPAHNLVTTIDLWVQIRGIPLPYV 135
Query: 95 NDKTINLLAKGIGNFVPATAEEAATWK-SFGKVKIEVSICKPLPKSVYLQIMGGKTIQVF 153
+++T+ +A+ +G + EA + + +F +V++ I L + G+T +
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATIR 195
Query: 154 LRFERLGRFCLFCGFLGHTMGFCPRRLKLLDLMKE 188
++ERL R C C H +CP R + L + +E
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCPYRQRSLSIARE 230
>AT5G25200.1 | Ta11-like non-LTR retrotransposon |
Chr5:8716766-8717869 REVERSE LENGTH=367 | 201606
Length = 367
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 37 VKFGTTGEVDYII--SKAPWIIKEDIFLVERCIKEKSPLEHEFDKAWFTVQFHDLPYHML 94
V+F E+D ++ + PW+ + V + +P + VQ +P +
Sbjct: 78 VQFLFANEIDLMMVQRREPWLFNN--WFVAATRWQVAPAHNLVTTIDLWVQIRGIPLPYV 135
Query: 95 NDKTINLLAKGIGNFVPATAEEAATWK-SFGKVKIEVSICKPLPKSVYLQIMGGKTIQVF 153
+++T+ +A+ +G + EA + + +F +V++ I L + G+T +
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATIR 195
Query: 154 LRFERLGRFCLFCGFLGHTMGFCPRRLKLLDLMKE 188
++ERL R C C H +CP R + L + +E
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCPYRQRPLSIARE 230