BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1520.1
(161 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49990.1 | Low temperature viability protein | Chr3:18532492-... 89 7e-21
>AT3G49990.1 | Low temperature viability protein |
Chr3:18532492-18534000 REVERSE LENGTH=502 | 201606
Length = 502
Score = 88.6 bits (218), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 87/179 (48%), Gaps = 52/179 (29%)
Query: 1 MREIKKSGGGSAYYENSKAKLDQVPLDVKAYDASR------------------------- 35
+REIK +GGGS +Y N K ++ Q+P DVKAYDASR
Sbjct: 109 LREIKNTGGGSNFYVNPKYEVAQLPRDVKAYDASRVKISGMVNEEGNDNKLMYSVASKTV 168
Query: 36 -----RAVDEEVAALLDANEDDLLWFGLDVEEFEEDFVVKANLPEEGEEDEIVDDKINQH 90
+A+D EVAALL+ D FG DVE+ EEDFVV+ANL ++GE + N
Sbjct: 169 NVKVQKAIDPEVAALLE--NSDGSEFGSDVEDLEEDFVVQANLTQKGESSGVS----NGE 222
Query: 91 LEV-LNSETSEADHLDPEEGEVFGAADLRLNQTEEEPRARRLLDEQFDMLTLQEYGTNS 148
LE + E E + +P E PR R +DE FD L L EYG++S
Sbjct: 223 LEFSVRREVRERESDEP---------------VAENPRVPRQIDELFDQLELNEYGSDS 266