BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1540.1
(337 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 61 5e-10
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 61 5e-10
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 53 3e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 147 ELAEKPKDQKIVDSEWIFKKKEGILGMEDSRYKARLEAKGFTQQEGTDFNEVFSLVGKHS 206
E+ P ++K + +W++K K G + RYKARL AKG+TQQEG DF E FS V K +
Sbjct: 116 EICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLT 174
Query: 207 SIRVLLA 213
S++++LA
Sbjct: 175 SVKLILA 181
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 147 ELAEKPKDQKIVDSEWIFKKKEGILGMEDSRYKARLEAKGFTQQEGTDFNEVFSLVGKHS 206
E+ P ++K + +W++K K G + RYKARL AKG+TQQEG DF E FS V K +
Sbjct: 116 EICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLT 174
Query: 207 SIRVLLA 213
S++++LA
Sbjct: 175 SVKLILA 181
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 148 LAEKPKDQKIVDSEWIFKKKEGILGMEDSRYKARLEAKGFTQQEGTDFNEVFSLVGKHSS 207
L P +Q I+ +W+FK K G D R KARL AKGF Q+EG F E +S V + ++
Sbjct: 59 LVPPPVNQNILGCKWVFKTKLHSDGTLD-RLKARLVAKGFHQEEGIYFVETYSPVVRTAT 117
Query: 208 IRVLLAAVRSQKRGRE 223
IR +L + + G+
Sbjct: 118 IRTILNVAQQLEVGQS 133