BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1580.1
(281 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 66 1e-12
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 59 1e-09
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 59 1e-09
AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920... 56 9e-09
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 66.2 bits (160), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 45 YHVWRERNRYIFEGHTRSVQEVICEIVDEVKIKTNAGTKRVEDTLENNTLVEGWNLGLSL 104
+ +WR RN+ +F+ S Q + D+V+ NA + +L + T+ EG N S
Sbjct: 2 WRLWRSRNQLVFQHQNLSWQSTLKRAKDDVQEWENA--QEYIQSLNHYTVREGCNNREST 59
Query: 105 VQPKYIFTKWIGPSPGIYQINTDGSLD--NENAGYGALIRDFSGKVLAAATAM-TPKQSI 161
Q KW P G + N DGS + + G LIRD G AA A+ +
Sbjct: 60 HQ------KWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNA 113
Query: 162 FYHELQAVELGLRLAVERGLDPVLIKSDSLNVVGLLTKSGQ---SVPWKVKKLWKRVQRL 218
ELQA+ + ++ +G V+ + DS V LL + + W +++ W +R
Sbjct: 114 LESELQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFGAFNW-IREAWSWSKRF 172
Query: 219 KEHFTSVTVEHTYRESNQAADYLAKMRLRVGESVLAVDGLPPELVNIITSD 269
+E V T R +NQ AD LAK L S + +P + N + +
Sbjct: 173 EE----VIFSWTPRTNNQPADMLAKSHLPQDTSFIYHYFVPNFITNALHCN 219
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 44 FYHVWRERNRYIFEGHTRSVQEVICEIVDEVKIKTNAGTKRVEDTLENNTLVEGWNLGLS 103
+ +W+ RN +F+G EV+ +++ + T+R + + VE NL +
Sbjct: 81 LWRLWKSRNELMFKGKEYDAPEVLRRAMEDFE---EWSTRRELEGKASGPQVER-NLSVQ 136
Query: 104 LVQPKYIFTKWIGPSPGIYQINTDGS--LDNENAGYGALIRDFSGKVL-AAATAMTPKQS 160
P Y +W+ + NTD + L+N G G ++R+ SG VL A A+ ++
Sbjct: 137 WKAPPY---QWV-------KCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKN 186
Query: 161 IFYHELQAVELGLRLAVERGLDPVLIKSDSLNVVGLLTKSGQSVPWKVKKLWKRVQRLKE 220
+ EL+A+ + ++ +SD+ +V LL S P ++ + +Q+L
Sbjct: 187 VLEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLN-SDDFWP-TLQPALEDIQQLLH 244
Query: 221 HFTSVTVEHTYRESNQAADYLAKMRLRVGESVLAVDGLPPELVNIITSDTRGSV 274
HF V E T R N+ AD R+ ++ P+L +I+ R ++
Sbjct: 245 HFEEVKFEFTPRGGNKVAD-------RIARESISFSNYDPKLFSIVPQWLRSTL 291
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 28/235 (11%)
Query: 44 FYHVWRERNRYIFEGHTRSVQEVICEIVDEVKIKTNAGTKRVEDTLENNTL-VEGWNLGL 102
+ +W+ RN +F G + QEV+ +R ED LE + E + G
Sbjct: 364 LWRLWKNRNELVFRGREFNAQEVL---------------RRAEDDLEEWRIRTEAESCGT 408
Query: 103 SLVQPKYIFTKWIGPSPGIYQINTDGSL--DNENAGYGALIRDFSGKVLAAATAMTPK-Q 159
+ +W P + NTD + DNE G G ++R+ G+V PK +
Sbjct: 409 KPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLK 468
Query: 160 SIFYHELQAVELGLRLAVERGLDPVLIKSDSLNVVGLLTKSGQSVPWKVKKLWKRVQRLK 219
S+ EL+A+ + + V+ +SDS ++ +L + + P +K + +QRL
Sbjct: 469 SVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILN-NDEIWP-SLKPTIQDLQRLL 526
Query: 220 EHFTSVTVEHTYRESNQAADYLAKMRLRVGESVLAVDGLPPELVNIITSDTRGSV 274
FT V RE N A+ +A+ L S L D P+L +I+ S R S+
Sbjct: 527 SQFTEVKFVFIPREGNTLAERVARESL----SFLNYD---PKLYSIVPSWARSSM 574
>AT3G25270.1 | Ribonuclease H-like superfamily protein |
Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
Length = 343
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 21/233 (9%)
Query: 44 FYHVWRERNRYIFEGHTRSVQEVICEIVDEVKIKTNAGTKRVEDTLENNTLVEGWNLGLS 103
+ +W+ RN+ +F+ + S Q + ++V+ EDT NT V+ N +
Sbjct: 124 LWRLWKSRNQLVFQQKSISWQNTLQRARNDVQ--------EWEDT---NTYVQSLNQQVH 172
Query: 104 LV---QPKYIFTKWIGPSPGIYQINTDGSLDNE--NAGYGALIRDFSGKVLAAATAMTPK 158
QP TKW P + N DG+ +++ NA G L+RD +G + + A+
Sbjct: 173 SSRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGST 232
Query: 159 QS-IFYHELQAVELGLRLAVERGLDPVLIKSDSLNVVGLLTKSGQSVPWKVKKLWKRVQR 217
S E QA+ + ++ A +G V+ + DS V L+ + + W R R
Sbjct: 233 TSDSLESEFQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNF---GRFNWIREGR 289
Query: 218 L-KEHFTSVTVEHTYRESNQAADYLAKMRLRVGESVLAVDGLPPELVNIITSD 269
++ F + R +NQ AD LAK L+ +S +P + + + D
Sbjct: 290 FWQKRFEEAVFKWVPRTNNQPADILAKHHLQPNQSFKFHYYVPAFITSTLYYD 342