BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1620.1
(439 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49250.1 | defective in meristem silencing 3 | Chr3:18258613-... 380 e-129
AT5G24280.3 | gamma-irradiation and mitomycin c induced 1 | Chr5... 158 1e-41
AT5G24280.2 | gamma-irradiation and mitomycin c induced 1 | Chr5... 158 1e-41
AT5G24280.1 | gamma-irradiation and mitomycin c induced 1 | Chr5... 158 1e-41
AT5G24275.4 | En/Spm-like transposon | Chr5:8244950-8246985 REVE... 126 7e-32
>AT3G49250.1 | defective in meristem silencing 3 |
Chr3:18258613-18260803 REVERSE LENGTH=420 | 201606
Length = 420
Score = 380 bits (976), Expect = e-129, Method: Compositional matrix adjust.
Identities = 203/412 (49%), Positives = 287/412 (69%), Gaps = 13/412 (3%)
Query: 18 PLAVQESLSLTPMDVSKPG-------STPVA--EIRNGEDLVKVGSIVDNTKKLQDELEK 68
P Q S TP++V P S+PVA E +NG + + N+K+L+ +LE
Sbjct: 3 PTGQQISFQTTPLNVQDPTRMMNLDQSSPVARNETQNGGGIAHAEFAMFNSKRLESDLEA 62
Query: 69 LGCKIKDHEDNIKFLKTLKDNLHESILDMQVNLGKYHSASVGTAANENSSHIQAEDGTVE 128
+G KIK HEDN+KFLK+ K+ + E+I+D+QV++ K +S+ + N ++S +Q ED
Sbjct: 63 MGNKIKQHEDNLKFLKSQKNKMDEAIVDLQVHMSKLNSSPTPRSENSDNS-LQGEDINA- 120
Query: 129 QILKQEKSAAGILCQLKTRHETQASHLPFMKDVLGIVATLGKVDNENLSRLLSEYLGLET 188
QIL+ E SAAG+L ++T H QAS L K V+G+VA LGKV++ENLS++LS YLG +
Sbjct: 121 QILRHENSAAGVLSLVETLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLGTRS 180
Query: 189 MTAIVCKTFEGVKALETYDKEGNISKSTGLHGLGPPLGRHLEGRFLVICLEGLRPYVGEL 248
M A+VC+ +E V ALE YD GNI + GLH LG +GR + F ICLE LRPYVG+
Sbjct: 181 MLAVVCRNYESVTALEAYDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENLRPYVGQH 240
Query: 249 VIDDPQQKLALIKPRLPSGECPPGFLGFAVNMIDLDFSYLSYRTASGHGLRPTLFYSLFS 308
+ DD Q++L L+KP+LP+GECPPGFLGFAVNMI +D +YL T+ G+GLR TLFY+LFS
Sbjct: 241 IADDLQRRLDLLKPKLPNGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYNLFS 300
Query: 309 RVQVYRTRGEMLLALPCISDGALSLDGGMIKSGGTFSLGDRKVVEVRFAVRSRTSYMSSN 368
R+QVY+TR +M+ ALPCISDGA+SLDGG+I+ G F+LG+R V VRFA + + M +
Sbjct: 301 RLQVYKTRADMISALPCISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTM--D 358
Query: 369 DYREAEEKLKFTKWEQERIVHEMQREEILLNNVKFQFQAKRKEFVKFLAESS 420
+Y EAE+K+K KW++E+ + +++RE++L + F F K++EFV+ LA+SS
Sbjct: 359 NYSEAEKKMKELKWKKEKTLEDIKREQVLREHAVFNFGKKKEEFVRCLAQSS 410
>AT5G24280.3 | gamma-irradiation and mitomycin c induced 1 |
Chr5:8251378-8261401 REVERSE LENGTH=1566 | 201606
Length = 1566
Score = 158 bits (400), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 10/212 (4%)
Query: 132 KQEKSAAGILCQLKTRHETQASHLPFMKDVLGIVATLGKVDNENLSRLLSEYLGLETMTA 191
K +AA + C L + S K + G+VA LG V + +LSR+LSEYLG +TM +
Sbjct: 1292 KHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLS 1351
Query: 192 IVCKTFEGVKALETYDKEGNISKSTGLHGLGPPLGRHLEGRFLVICLEGLRPYVGELVID 251
+VCK+ + + Y K LGR + RFLVICL+ RP+ LV +
Sbjct: 1352 LVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLVICLDATRPWRNGLVRN 1402
Query: 252 DPQQKLALIKPRLPSGECPPGFLGFAVNMIDLDFSYLSYRTASGHGLRPTLFYSLFSRVQ 311
DPQ++LA+ P LP+G+ PGF G+AVNMIDL L +++SG+GLR TLFY +F +Q
Sbjct: 1403 DPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRETLFYGVFRELQ 1462
Query: 312 VYRTRGEMLLALPCISDG-ALSLDGGMIKSGG 342
VY T + ALP I+ G A+SLDG + + G
Sbjct: 1463 VYETAEHLEAALPHINGGDAVSLDGVIARENG 1494
>AT5G24280.2 | gamma-irradiation and mitomycin c induced 1 |
Chr5:8251378-8261401 REVERSE LENGTH=1566 | 201606
Length = 1566
Score = 158 bits (400), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 10/212 (4%)
Query: 132 KQEKSAAGILCQLKTRHETQASHLPFMKDVLGIVATLGKVDNENLSRLLSEYLGLETMTA 191
K +AA + C L + S K + G+VA LG V + +LSR+LSEYLG +TM +
Sbjct: 1292 KHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLS 1351
Query: 192 IVCKTFEGVKALETYDKEGNISKSTGLHGLGPPLGRHLEGRFLVICLEGLRPYVGELVID 251
+VCK+ + + Y K LGR + RFLVICL+ RP+ LV +
Sbjct: 1352 LVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLVICLDATRPWRNGLVRN 1402
Query: 252 DPQQKLALIKPRLPSGECPPGFLGFAVNMIDLDFSYLSYRTASGHGLRPTLFYSLFSRVQ 311
DPQ++LA+ P LP+G+ PGF G+AVNMIDL L +++SG+GLR TLFY +F +Q
Sbjct: 1403 DPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRETLFYGVFRELQ 1462
Query: 312 VYRTRGEMLLALPCISDG-ALSLDGGMIKSGG 342
VY T + ALP I+ G A+SLDG + + G
Sbjct: 1463 VYETAEHLEAALPHINGGDAVSLDGVIARENG 1494
>AT5G24280.1 | gamma-irradiation and mitomycin c induced 1 |
Chr5:8251378-8261401 REVERSE LENGTH=1598 | 201606
Length = 1598
Score = 158 bits (399), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 10/212 (4%)
Query: 132 KQEKSAAGILCQLKTRHETQASHLPFMKDVLGIVATLGKVDNENLSRLLSEYLGLETMTA 191
K +AA + C L + S K + G+VA LG V + +LSR+LSEYLG +TM +
Sbjct: 1324 KHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLS 1383
Query: 192 IVCKTFEGVKALETYDKEGNISKSTGLHGLGPPLGRHLEGRFLVICLEGLRPYVGELVID 251
+VCK+ + + Y K LGR + RFLVICL+ RP+ LV +
Sbjct: 1384 LVCKSSQFGPKSDEYRK---------FQSEAASLGRSITNRFLVICLDATRPWRNGLVRN 1434
Query: 252 DPQQKLALIKPRLPSGECPPGFLGFAVNMIDLDFSYLSYRTASGHGLRPTLFYSLFSRVQ 311
DPQ++LA+ P LP+G+ PGF G+AVNMIDL L +++SG+GLR TLFY +F +Q
Sbjct: 1435 DPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRETLFYGVFRELQ 1494
Query: 312 VYRTRGEMLLALPCISDG-ALSLDGGMIKSGG 342
VY T + ALP I+ G A+SLDG + + G
Sbjct: 1495 VYETAEHLEAALPHINGGDAVSLDGVIARENG 1526
>AT5G24275.4 | En/Spm-like transposon | Chr5:8244950-8246985 REVERSE
LENGTH=430 | 201606
Length = 430
Score = 126 bits (317), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 103/185 (55%), Gaps = 26/185 (14%)
Query: 132 KQEKSAAGILCQLKTRHETQASHLPFMKDVLGIVATLGKVDNENLSRLLSEYLGLETMTA 191
K +AA + C L + S K V G+VA LG V + +LSR+LSEYLG + + A
Sbjct: 268 KHHDTAASVFCCLYRKSPPPQSLFLSKKGVFGLVALLGSVASTSLSRVLSEYLGEDMLLA 327
Query: 192 IVCKTFEGVKALETYDKEGNISKSTGLHGLGPPLGRHL----EGRFLVICLEGLRPYVGE 247
+VCK+ + +GP L RF V+CL+ +RP+
Sbjct: 328 LVCKSAQ----------------------IGPNNAEFLRLQSNHRFHVLCLDAIRPWKDG 365
Query: 248 LVIDDPQQKLALIKPRLPSGECPPGFLGFAVNMIDLDFSYLSYRTASGHGLRPTLFYSLF 307
L+ +DPQ+KLA+ P+LP G+ PGF G+AVNMIDL L+ +T SG+GLR TLFY+LF
Sbjct: 366 LLENDPQKKLAMDDPKLPDGDPIPGFKGYAVNMIDLAPEELTVQTYSGYGLRETLFYNLF 425
Query: 308 SRVQV 312
+QV
Sbjct: 426 GNLQV 430