BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1690.1
(173 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 59 1e-10
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 57 1e-09
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 1e-08
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 1e-08
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 1e-08
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 58.5 bits (140), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 13 KWQPSPQNFIKVNVDASFTNITSNVGISLIVHNAESKFIEAKVKSTRAR-NSEEGEAMAI 71
KW P ++ +K N DAS + G+ I+ N++ IE + + R +EE E +
Sbjct: 104 KWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTL 163
Query: 72 LLGLEWVKANQLKNIIVESDNINLIKHLHNKHHTLHWQSLIHIQRIRDSRKEFEVVKFKY 131
+ ++ K +I E DN + + ++ K Q + I+ FE ++F +
Sbjct: 164 IWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQHFLDT--IQSWIPSFESIEFSF 221
Query: 132 TKRELNSSADRLAKWARKKNASKEWKNVPCILVNKYCNN 170
RE N AD LAK A K+N + ++ Y NN
Sbjct: 222 KHREQNGCADFLAKQAIKENTQWSLFHSCPYFLSPYVNN 260
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 56.6 bits (135), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 3 QEKIKHTSSEKWQPSPQNFIKVNVDASFTNITSNVGISLIVHN--AESKFIEAKVKSTRA 60
+ ++ +S +W+P P ++K N DA++ GI ++ N E K++ A+ +
Sbjct: 409 KPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARAL-PKL 467
Query: 61 RNSEEGEAMAILLGLEWVKANQLKNIIVESDNINLIKHLHNKHHTLHWQSL-IHIQRIRD 119
++ E E A+ + + Q +I ESD+ LI+ L+N W SL IQ ++
Sbjct: 468 KSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDE---IWPSLKPTIQDLQR 524
Query: 120 SRKEFEVVKFKYTKRELNSSADRLAK 145
+F VKF + RE N+ A+R+A+
Sbjct: 525 LLSQFTEVKFVFIPREGNTLAERVAR 550
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 52.8 bits (125), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 1 MKQEKIKHTSSEKWQPSPQNFIKVNVDASFTNITSNVGISLIVHNAESKFIEAKVKSTRA 60
+K + K + ++KWQ ++K N D S + G+ I+ N++ ++ +
Sbjct: 17 VKGGQTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQG 76
Query: 61 RNS-EEGEAMAILLGLEWVKANQLKNIIVESDNINLIKHLHNKHHTLHWQSLIHIQRIRD 119
R + +E E A++ ++ + + E DNI + + + NK + +++ I+
Sbjct: 77 RQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPRLR--YYLEFIQQ 134
Query: 120 SRKEFEVVKFKYTKRELNSSADRLAK 145
K F VKF + RE N D LAK
Sbjct: 135 WSKAFTTVKFTFRHREQNVCVDVLAK 160
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 52.8 bits (125), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 7 KHTSSEKWQPSPQNFIKVNVDASFTNITSNVGISLIVHNAESKF-IEAKVKSTRARNSEE 65
+ ++ +KW+ P +IK N D SF T ++ + + + A+ N+ E
Sbjct: 56 RESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNALE 115
Query: 66 GEAMAILLGLEWVKANQLKNIIVESDNINLIKHLHNKHHTLHWQSLIHIQRIRDSRKEFE 125
E A+++ ++ + + +I E D+ + + L+ K +H+ + I+ K FE
Sbjct: 116 SELQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQ--MHFGAFNWIREAWSWSKRFE 173
Query: 126 VVKFKYTKRELNSSADRLAK 145
V F +T R N AD LAK
Sbjct: 174 EVIFSWTPRTNNQPADMLAK 193
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 53.5 bits (127), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 5 KIKHTSSEKWQPSPQNFIKVNVDASFTNITSNVGISLIVHNAESKFIEAKVKS-TRARNS 63
+++ S +W+ P ++K N DA++ GI I+ N + ++ R +N
Sbjct: 128 QVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNV 187
Query: 64 EEGEAMAILLGLEWVKANQLKNIIVESDNINLIKHLHNKHHTLHWQSL-IHIQRIRDSRK 122
E E A+ + + K II ESD L+ L++ W +L ++ I+
Sbjct: 188 LEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDF---WPTLQPALEDIQQLLH 244
Query: 123 EFEVVKFKYTKRELNSSADRLAK 145
FE VKF++T R N ADR+A+
Sbjct: 245 HFEEVKFEFTPRGGNKVADRIAR 267