BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1700.1
(145 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32540.1 | lsd one like 1 | Chr1:11768253-11769591 FORWARD LE... 233 1e-79
AT1G32540.3 | lsd one like 1 | Chr1:11768043-11769591 FORWARD LE... 231 3e-79
AT1G32540.2 | lsd one like 1 | Chr1:11768043-11769591 FORWARD LE... 231 3e-79
AT1G32540.5 | lsd one like 1 | Chr1:11768043-11769461 FORWARD LE... 209 1e-70
AT1G32540.7 | lsd one like 1 | Chr1:11768253-11768771 FORWARD LE... 144 5e-45
>AT1G32540.1 | lsd one like 1 | Chr1:11768253-11769591 FORWARD
LENGTH=187 | 201606
Length = 187
Score = 233 bits (595), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 115/133 (86%), Positives = 121/133 (90%), Gaps = 1/133 (0%)
Query: 13 VPFTAPPNGAQSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGTEMAQLVCGGCHT 72
+ F +G QSQLVCSGCRNLL+YP GA+SVCCAVCNAVT VPPPGTEMAQLVCGGCHT
Sbjct: 56 LRFVGSTSG-QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHT 114
Query: 73 LLMYIRGATSVQCSCCNTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSV 132
LLMYIRGATSVQCSCC+TVNLALEANQVAHVNCGNC MLLMYQYGARSVKCAVCNFVTSV
Sbjct: 115 LLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARSVKCAVCNFVTSV 174
Query: 133 GASPSTTEQKFNN 145
G S STT+ KFNN
Sbjct: 175 GGSTSTTDSKFNN 187
>AT1G32540.3 | lsd one like 1 | Chr1:11768043-11769591 FORWARD
LENGTH=154 | 201606
Length = 154
Score = 231 bits (590), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 117/133 (87%), Positives = 122/133 (91%), Gaps = 3/133 (2%)
Query: 16 TAPPNGA---QSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGTEMAQLVCGGCHT 72
T P NG+ QSQLVCSGCRNLL+YP GA+SVCCAVCNAVT VPPPGTEMAQLVCGGCHT
Sbjct: 22 TPPANGSTSGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHT 81
Query: 73 LLMYIRGATSVQCSCCNTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSV 132
LLMYIRGATSVQCSCC+TVNLALEANQVAHVNCGNC MLLMYQYGARSVKCAVCNFVTSV
Sbjct: 82 LLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARSVKCAVCNFVTSV 141
Query: 133 GASPSTTEQKFNN 145
G S STT+ KFNN
Sbjct: 142 GGSTSTTDSKFNN 154
>AT1G32540.2 | lsd one like 1 | Chr1:11768043-11769591 FORWARD
LENGTH=154 | 201606
Length = 154
Score = 231 bits (590), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 117/133 (87%), Positives = 122/133 (91%), Gaps = 3/133 (2%)
Query: 16 TAPPNGA---QSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGTEMAQLVCGGCHT 72
T P NG+ QSQLVCSGCRNLL+YP GA+SVCCAVCNAVT VPPPGTEMAQLVCGGCHT
Sbjct: 22 TPPANGSTSGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHT 81
Query: 73 LLMYIRGATSVQCSCCNTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSV 132
LLMYIRGATSVQCSCC+TVNLALEANQVAHVNCGNC MLLMYQYGARSVKCAVCNFVTSV
Sbjct: 82 LLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARSVKCAVCNFVTSV 141
Query: 133 GASPSTTEQKFNN 145
G S STT+ KFNN
Sbjct: 142 GGSTSTTDSKFNN 154
>AT1G32540.5 | lsd one like 1 | Chr1:11768043-11769461 FORWARD
LENGTH=159 | 201606
Length = 159
Score = 209 bits (533), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 111/131 (84%), Positives = 117/131 (89%), Gaps = 3/131 (2%)
Query: 16 TAPPNGA---QSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGTEMAQLVCGGCHT 72
T P NG+ QSQLVCSGCRNLL+YP GA+SVCCAVCNAVT VPPPGTEMAQLVCGGCHT
Sbjct: 22 TPPANGSTSGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHT 81
Query: 73 LLMYIRGATSVQCSCCNTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSV 132
LLMYIRGATSVQCSCC+TVNLALEANQVAHVNCGNC MLLMYQYGARSVKCAVCNFVTSV
Sbjct: 82 LLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARSVKCAVCNFVTSV 141
Query: 133 GASPSTTEQKF 143
G S + +K
Sbjct: 142 GVSSLSLSKKI 152
>AT1G32540.7 | lsd one like 1 | Chr1:11768253-11768771 FORWARD
LENGTH=143 | 201606
Length = 143
Score = 144 bits (363), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Query: 13 VPFTAPPNGAQSQLVCSGCRNLLLYPAGASSVCCAVCNAVTPVPPPGTEMAQLVCGGCHT 72
+ F +G QSQLVCSGCRNLL+YP GA+SVCCAVCNAVT VPPPGTEMAQLVCGGCHT
Sbjct: 56 LRFVGSTSG-QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHT 114
Query: 73 LLMYIRGATSVQCSCCNTVNLALEA 97
LLMYIRGATSVQCSCC+TVNLALE
Sbjct: 115 LLMYIRGATSVQCSCCHTVNLALEG 139
Score = 55.5 bits (132), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 63 AQLVCGGCHTLLMYIRGATSVQCSCCNTVNLALE-ANQVAHVNCGNCRMLLMYQYGARSV 121
+QLVC GC LLMY GATSV C+ CN V ++A + CG C LLMY GA SV
Sbjct: 66 SQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSV 125
Query: 122 KCAVCNFV 129
+C+ C+ V
Sbjct: 126 QCSCCHTV 133