BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1800.1
(222 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 77 5e-16
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 77 5e-16
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 65 7e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 77.0 bits (188), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 141 ILLIEDNEPNTYKEAMTSPDSEKWLGAMKSEMESMSENQVWNLVDLPDEVEPIGCKWIFK 200
+ + + EP+TY EA + W GAM E+ +M W + LP +PIGCKW++K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 201 MKTDRDGNVSVFKARLVAKGY 221
+K + DG + +KARLVAKGY
Sbjct: 135 IKYNSDGTIERYKARLVAKGY 155
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 77.0 bits (188), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 141 ILLIEDNEPNTYKEAMTSPDSEKWLGAMKSEMESMSENQVWNLVDLPDEVEPIGCKWIFK 200
+ + + EP+TY EA + W GAM E+ +M W + LP +PIGCKW++K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 201 MKTDRDGNVSVFKARLVAKGY 221
+K + DG + +KARLVAKGY
Sbjct: 135 IKYNSDGTIERYKARLVAKGY 155
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 64.7 bits (156), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 148 EPNTYKEAMTSPDSEKWLGAMKSEMESMSENQVWNLVDLPDEVEPIGCKWIFKMKTDRDG 207
EP + A+ P W AM+ E++++S N+ W LV P +GCKW+FK K DG
Sbjct: 27 EPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83
Query: 208 NVSVFKARLVAKGYR 222
+ KARLVAKG+
Sbjct: 84 TLDRLKARLVAKGFH 98