BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1810.1
(185 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 61 5e-11
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 61 5e-11
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 54 6e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 61.2 bits (147), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 72/252 (28%)
Query: 2 LKSIRIILAIATHYDYEIWQMDVKTAFLNGKLEEDVYMTQPEGFE----DSKNAGKVCKL 57
L S+++ILAI+ Y++ + Q+D+ AFLNG L+E++YM P G+ DS VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 58 QRKCFSMKDL---------------------GDAEYILGIK--------IYIDRSRKMIG 88
++ + +K D Y L I +Y+D +I
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVD--DIIIC 290
Query: 89 LNQETYIDKVLGRFKMEDSKRGFLPMTH----STTRSK---------------------- 122
N + +D++ + K R P+ + RS
Sbjct: 291 SNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLG 350
Query: 123 ---TQCPRDPDELA-------YMKKVPYASAIGSIMYAMVCTRPDVSYALSMCSRYQSNP 172
+ P DP ++ Y IG +MY + TR D+S+A++ S++ P
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAP 409
Query: 173 GEKHWTAAKKIL 184
H A KIL
Sbjct: 410 RLAHQQAVMKIL 421
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 61.2 bits (147), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 72/252 (28%)
Query: 2 LKSIRIILAIATHYDYEIWQMDVKTAFLNGKLEEDVYMTQPEGFE----DSKNAGKVCKL 57
L S+++ILAI+ Y++ + Q+D+ AFLNG L+E++YM P G+ DS VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 58 QRKCFSMKDL---------------------GDAEYILGIK--------IYIDRSRKMIG 88
++ + +K D Y L I +Y+D +I
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVD--DIIIC 290
Query: 89 LNQETYIDKVLGRFKMEDSKRGFLPMTH----STTRSK---------------------- 122
N + +D++ + K R P+ + RS
Sbjct: 291 SNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLG 350
Query: 123 ---TQCPRDPDELA-------YMKKVPYASAIGSIMYAMVCTRPDVSYALSMCSRYQSNP 172
+ P DP ++ Y IG +MY + TR D+S+A++ S++ P
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAP 409
Query: 173 GEKHWTAAKKIL 184
H A KIL
Sbjct: 410 RLAHQQAVMKIL 421
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 54.3 bits (129), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 62 FSMKDLGDAEYILGIKIYIDRSRKMIGLNQETYIDKVLGRFKMEDSK--RGFLPMTHSTT 119
FSMKDLG Y LGI+I S + L+Q Y +++L M D K LP+ +++
Sbjct: 31 FSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSS 88
Query: 120 RSKTQCPRDPDELAYMKKVPYASAIGSIMYAMVCTRPDVSYALSMCSRYQSNPGEKHWTA 179
S + P DP + + S +G++ Y + TRPD+SYA+++ + P +
Sbjct: 89 VSTAKYP-DPSD--------FRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDL 138
Query: 180 AKKILK 185
K++L+
Sbjct: 139 LKRVLR 144