BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1820.1
(171 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 85 2e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 85 2e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 84.7 bits (208), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 1 LVYGGKDELIVEGHVDVSFQTDRDDFLSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEY 60
L Y + E+ ++ D SFQ+ +D S +GY L +SWKS KQ V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 61 LAASEAAKEGVWIKKFISELGVVPSIENGVTIYCDNNGAIAQAKEPRAHQKSKHILRKYH 120
A S A E +W+ +F EL + + ++CDN AI A H+++KHI H
Sbjct: 492 RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 549
Query: 121 VIRE 124
+RE
Sbjct: 550 SVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 84.7 bits (208), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 1 LVYGGKDELIVEGHVDVSFQTDRDDFLSQSGYVFCLNGGAVSWKSSKQTTVADSTTEAEY 60
L Y + E+ ++ D SFQ+ +D S +GY L +SWKS KQ V+ S+ EAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491
Query: 61 LAASEAAKEGVWIKKFISELGVVPSIENGVTIYCDNNGAIAQAKEPRAHQKSKHILRKYH 120
A S A E +W+ +F EL + + ++CDN AI A H+++KHI H
Sbjct: 492 RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 549
Query: 121 VIRE 124
+RE
Sbjct: 550 SVRE 553