BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1830.1
(250 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 77 8e-16
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 77 8e-16
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 60 2e-10
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 54 8e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 77.0 bits (188), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%)
Query: 19 KWVFKIDTEERNSQPWYKARLVVKGFGQKKGIDFDEIFSPVVKMSSIRLLLGLAASMNLE 78
KWV+KI + YKARLV KG+ Q++GIDF E FSPV K++S++L+L ++A N
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 79 IEQLDVKTVFLH 90
+ QLD+ FL+
Sbjct: 190 LHQLDISNAFLN 201
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 119 ISRLKKELNKYFDMKDLGPAKQMIGMHISCNEKVGKFWLSQERYIEKVLEMFNIDKTKPV 178
+ LK +L F ++DLGP K +G+ I+ + Q +Y +L+ + KP
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 179 SCPLDSHFKLTHDQCPSTRCEKEEMEKIPYASAVGSMMYVMVCTRPDIAYAAGVVSRFLA 238
S P+D S + ++ Y +G +MY+ + TR DI++A +S+F
Sbjct: 355 SVPMDPSVTF------SAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 239 NP 240
P
Sbjct: 408 AP 409
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 77.0 bits (188), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%)
Query: 19 KWVFKIDTEERNSQPWYKARLVVKGFGQKKGIDFDEIFSPVVKMSSIRLLLGLAASMNLE 78
KWV+KI + YKARLV KG+ Q++GIDF E FSPV K++S++L+L ++A N
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 79 IEQLDVKTVFLH 90
+ QLD+ FL+
Sbjct: 190 LHQLDISNAFLN 201
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 119 ISRLKKELNKYFDMKDLGPAKQMIGMHISCNEKVGKFWLSQERYIEKVLEMFNIDKTKPV 178
+ LK +L F ++DLGP K +G+ I+ + Q +Y +L+ + KP
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 179 SCPLDSHFKLTHDQCPSTRCEKEEMEKIPYASAVGSMMYVMVCTRPDIAYAAGVVSRFLA 238
S P+D S + ++ Y +G +MY+ + TR DI++A +S+F
Sbjct: 355 SVPMDPSVTF------SAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 239 NP 240
P
Sbjct: 408 AP 409
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 125 ELNKYFDMKDLGPAKQMIGMHISCNEKVGKFWLSQERYIEKVLEMFNIDKTKPVSCPLDS 184
+L+ F MKDLGP +G+ I + +LSQ +Y E++L + KP+S PL
Sbjct: 26 QLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQTKYAEQILNNAGMLDCKPMSTPLP- 82
Query: 185 HFKLTHDQCPSTRCEKEEMEKIPYASAVGSMMYVMVCTRPDIAYAAGVVSRFLANPVSSE 244
KL + + + I VG++ Y+ + TRPDI+YA +V + + P ++
Sbjct: 83 -LKLNSSVSTAKYPDPSDFRSI-----VGALQYLTL-TRPDISYAVNIVCQRMHEPTLAD 135
Query: 245 VD 246
D
Sbjct: 136 FD 137
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 54.3 bits (129), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 19 KWVFKIDTEERNSQPWYKARLVVKGFGQKKGIDFDEIFSPVVKMSSIRLLLGLAASMNLE 78
KWVFK + KARLV KGF Q++GI F E +SPVV+ ++IR +L +A LE
Sbjct: 72 KWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ--QLE 129
Query: 79 IEQ 81
+ Q
Sbjct: 130 VGQ 132