BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1840.1
(386 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 201 4e-57
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 201 4e-57
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 103 2e-25
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 201 bits (512), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 197/380 (51%), Gaps = 49/380 (12%)
Query: 3 ALYDMELEQLDAKTAFLHGELEEQIYMRQPEGFEILGRE----DQVCLLKKSLYGLKQSP 58
A+Y+ L QLD AFL+G+L+E+IYM+ P G+ + + VC LKKS+YGLKQ+
Sbjct: 184 AIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQAS 243
Query: 59 RQWYKCFDTFMVKNGYDRSRYDSCVYHMKLSDGSSVYLLLYVDDMLIASKDMSEIHMLKD 118
RQW+ F ++ G+ +S D Y +K++ + +L+YVDD++I S + + + LK
Sbjct: 244 RQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 119 QLKGEFEIKDLGASRKILGMEIRRDKSARKLFLSQKTYIEKVLERFGMTEAKPVGTPLAA 178
QLK F+++DLG + LG+EI R SA + + Q+ Y +L+ G+ KP P+
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360
Query: 179 HFKLSGELSPTTDDETEYMSRVPYANAVGSIMYAMVCTRPDISHVVSVVSRYMGRLGRGH 238
S +++ Y +G +MY + TR DIS V+ +S++ H
Sbjct: 361 SVTFSAH------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAH 413
Query: 239 WQAVKWILR----------------------------------KRSLTGYTFTLCGSAIS 264
QAV IL +RS GY L S IS
Sbjct: 414 QQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLIS 473
Query: 265 WRAVLQSVLALSTAEAEYMAATEAVKEAIWLSGLVRDLGLK-QEVTEVYCDNQSAIHLTK 323
W++ Q V++ S+AEAEY A + A E +WL+ R+L L + T ++CDN +AIH+
Sbjct: 474 WKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIAT 533
Query: 324 NQMYHERTKHIDVRYHFIKD 343
N ++HERTKHI+ H +++
Sbjct: 534 NAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 201 bits (512), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 197/380 (51%), Gaps = 49/380 (12%)
Query: 3 ALYDMELEQLDAKTAFLHGELEEQIYMRQPEGFEILGRE----DQVCLLKKSLYGLKQSP 58
A+Y+ L QLD AFL+G+L+E+IYM+ P G+ + + VC LKKS+YGLKQ+
Sbjct: 184 AIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQAS 243
Query: 59 RQWYKCFDTFMVKNGYDRSRYDSCVYHMKLSDGSSVYLLLYVDDMLIASKDMSEIHMLKD 118
RQW+ F ++ G+ +S D Y +K++ + +L+YVDD++I S + + + LK
Sbjct: 244 RQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 119 QLKGEFEIKDLGASRKILGMEIRRDKSARKLFLSQKTYIEKVLERFGMTEAKPVGTPLAA 178
QLK F+++DLG + LG+EI R SA + + Q+ Y +L+ G+ KP P+
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360
Query: 179 HFKLSGELSPTTDDETEYMSRVPYANAVGSIMYAMVCTRPDISHVVSVVSRYMGRLGRGH 238
S +++ Y +G +MY + TR DIS V+ +S++ H
Sbjct: 361 SVTFSAH------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAH 413
Query: 239 WQAVKWILR----------------------------------KRSLTGYTFTLCGSAIS 264
QAV IL +RS GY L S IS
Sbjct: 414 QQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLIS 473
Query: 265 WRAVLQSVLALSTAEAEYMAATEAVKEAIWLSGLVRDLGLK-QEVTEVYCDNQSAIHLTK 323
W++ Q V++ S+AEAEY A + A E +WL+ R+L L + T ++CDN +AIH+
Sbjct: 474 WKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIAT 533
Query: 324 NQMYHERTKHIDVRYHFIKD 343
N ++HERTKHI+ H +++
Sbjct: 534 NAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 103 bits (258), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 109/238 (45%), Gaps = 44/238 (18%)
Query: 94 VYLLLYVDDMLIASKDMSEIHMLKDQLKGEFEIKDLGASRKILGMEIRRDKSARKLFLSQ 153
+YLLLYVDD+L+ + ++ML QL F +KDLG LG++I+ S LFLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 154 KTYIEKVLERFGMTEAKPVGTPLAAHFKLSGELSPTTDDETEYMSRVPYANAVGSIMYAM 213
Y E++L GM + KP+ TPL KL+ +S +Y + + VG++ Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVS-----TAKYPDPSDFRSIVGALQY-L 110
Query: 214 VCTRPDISHVVSVVSRYMGRLGRGHWQAVKWILR-------------------------- 247
TRPDIS+ V++V + M + +K +LR
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 248 --------KRSLTGYTFTLCGSAISWRAVLQSVLALSTAEAEYMAATEAVKEAIWLSG 297
+RS TG+ L + ISW A Q ++ S+ E EY A E W S
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSSA 228