BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1880.1
(335 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58220.1 | transthyretin-like protein | Chr5:23554546-2355586... 352 e-121
AT5G58220.3 | transthyretin-like protein | Chr5:23554546-2355586... 332 e-113
AT5G58220.2 | transthyretin-like protein | Chr5:23554546-2355586... 288 1e-96
>AT5G58220.1 | transthyretin-like protein | Chr5:23554546-23555861
REVERSE LENGTH=324 | 201606
Length = 324
Score = 352 bits (902), Expect = e-121, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 235/335 (70%), Gaps = 11/335 (3%)
Query: 1 MESAFSEKDLLACCGSSKFAKEMIGEAPFPNFGLIVQSARNIWFNKVDVNGWLEAFAAHP 60
M E + CCGSS+FAK+M P + I +AR+IWFN+V+V WLEAF+AHP
Sbjct: 1 MAMEIGEDEWKVCCGSSEFAKQMSTSGPLTSQEAIY-TARDIWFNQVNVTDWLEAFSAHP 59
Query: 61 QIGDTSSKNQRSETSEQWSKGEQSTALATATDSTLQELLDWNLRYREKFGFVFLICASGR 120
QIG+T S + S+ + + S EQSTA AT + S LQEL +WN+ Y++KFGF+F+ICASGR
Sbjct: 60 QIGNTPSPSINSDFARR-SVSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGR 118
Query: 121 TTPEILAELKKRYLNRPIVEFETAAGEQMKITELRLAKLYAAKTEIASSSISQPLGNLMT 180
T E+L LK+RY NRPIVE E AA EQMKITELR+AKL++ K ++ S + S + ++
Sbjct: 119 THAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSS--SSPVS 176
Query: 181 KAGEDRVSIIGSHLTAATEAPTSKASQTSARTRPPITTHVLDVSRGSPAAGIEVKLEMWN 240
+DR+ IIG HL A EA K R+RPPITTHVLDVSRG+PAAG+EV LE+W+
Sbjct: 177 TKPQDRLRIIGGHLNVAAEAKAPK------RSRPPITTHVLDVSRGAPAAGVEVHLEVWS 230
Query: 241 GIRPRPLFGDPDSEGWVFQGSSITDNDGRSGHLMSIVDNVEPGMYRISFNTGKYIPGGFF 300
G P F W G+S TD DGRSG LM +VD + PG YRISF+T KY PG FF
Sbjct: 231 GTT-GPSFVHGGGGVWSSVGTSATDRDGRSGPLMDLVDALNPGTYRISFDTAKYSPGCFF 289
Query: 301 PHVAIVFEIKENQKSQHFHVPLLLSPFAFSTYRGS 335
P+V+IVF++ E+QK +HFHVPLLL+PF+FSTYRGS
Sbjct: 290 PYVSIVFQVTESQKWEHFHVPLLLAPFSFSTYRGS 324
>AT5G58220.3 | transthyretin-like protein | Chr5:23554546-23555861
REVERSE LENGTH=311 | 201606
Length = 311
Score = 332 bits (850), Expect = e-113, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 226/335 (67%), Gaps = 24/335 (7%)
Query: 1 MESAFSEKDLLACCGSSKFAKEMIGEAPFPNFGLIVQSARNIWFNKVDVNGWLEAFAAHP 60
M E + CCGSS+FAK+M P + I +AR+IWFN+V+V WLEAF+AHP
Sbjct: 1 MAMEIGEDEWKVCCGSSEFAKQMSTSGPLTSQEAIY-TARDIWFNQVNVTDWLEAFSAHP 59
Query: 61 QIGDTSSKNQRSETSEQWSKGEQSTALATATDSTLQELLDWNLRYREKFGFVFLICASGR 120
QIG+T S + S+ + + S EQSTA AT + S LQEL +WN+ Y++KFGF+F+ICASGR
Sbjct: 60 QIGNTPSPSINSDFARR-SVSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGR 118
Query: 121 TTPEILAELKKRYLNRPIVEFETAAGEQMKITELRLAKLYAAKTEIASSSISQPLGNLMT 180
T E+L LK+RY NRPIVE E AA EQMKITELR+AKL++ K ++ S + S
Sbjct: 119 THAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSSS------ 172
Query: 181 KAGEDRVSIIGSHLTAATEAPTSKASQTSARTRPPITTHVLDVSRGSPAAGIEVKLEMWN 240
S + + A +AP R+RPPITTHVLDVSRG+PAAG+EV LE+W+
Sbjct: 173 -------SPVSTKPQAEAKAPK--------RSRPPITTHVLDVSRGAPAAGVEVHLEVWS 217
Query: 241 GIRPRPLFGDPDSEGWVFQGSSITDNDGRSGHLMSIVDNVEPGMYRISFNTGKYIPGGFF 300
G P F W G+S TD DGRSG LM +VD + PG YRISF+T KY PG FF
Sbjct: 218 GTT-GPSFVHGGGGVWSSVGTSATDRDGRSGPLMDLVDALNPGTYRISFDTAKYSPGCFF 276
Query: 301 PHVAIVFEIKENQKSQHFHVPLLLSPFAFSTYRGS 335
P+V+IVF++ E+QK +HFHVPLLL+PF+FSTYRGS
Sbjct: 277 PYVSIVFQVTESQKWEHFHVPLLLAPFSFSTYRGS 311
>AT5G58220.2 | transthyretin-like protein | Chr5:23554546-23555861
REVERSE LENGTH=286 | 201606
Length = 286
Score = 288 bits (736), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 160/335 (47%), Positives = 206/335 (61%), Gaps = 49/335 (14%)
Query: 1 MESAFSEKDLLACCGSSKFAKEMIGEAPFPNFGLIVQSARNIWFNKVDVNGWLEAFAAHP 60
M E + CCGSS+FAK+M P + I +AR+IWFN+V+V WLEAF+AHP
Sbjct: 1 MAMEIGEDEWKVCCGSSEFAKQMSTSGPLTSQEAIY-TARDIWFNQVNVTDWLEAFSAHP 59
Query: 61 QIGDTSSKNQRSETSEQWSKGEQSTALATATDSTLQELLDWNLRYREKFGFVFLICASGR 120
QIG+T S + S+ + + S EQSTA AT + S LQEL +WN+ Y++KFGF+F+ICASGR
Sbjct: 60 QIGNTPSPSINSDFARR-SVSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGR 118
Query: 121 TTPEILAELKKRYLNRPIVEFETAAGEQMKITELRLAKLYAAKTEIASSSISQPLGNLMT 180
T E+L LK+RY NRPIVE E AA EQMKITELR+AKL++ K ++ S
Sbjct: 119 THAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISE----------- 167
Query: 181 KAGEDRVSIIGSHLTAATEAPTSKASQTSARTRPPITTHVLDVSRGSPAAGIEVKLEMWN 240
T ++ +P S Q AAG+EV LE+W+
Sbjct: 168 --------------TDSSSSPVSTKPQ---------------------AAGVEVHLEVWS 192
Query: 241 GIRPRPLFGDPDSEGWVFQGSSITDNDGRSGHLMSIVDNVEPGMYRISFNTGKYIPGGFF 300
G P F W G+S TD DGRSG LM +VD + PG YRISF+T KY PG FF
Sbjct: 193 GTT-GPSFVHGGGGVWSSVGTSATDRDGRSGPLMDLVDALNPGTYRISFDTAKYSPGCFF 251
Query: 301 PHVAIVFEIKENQKSQHFHVPLLLSPFAFSTYRGS 335
P+V+IVF++ E+QK +HFHVPLLL+PF+FSTYRGS
Sbjct: 252 PYVSIVFQVTESQKWEHFHVPLLLAPFSFSTYRGS 286