BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1890.1
(80 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22370.1 | alternative oxidase 1A | Chr3:7906890-7908416 FORW... 150 5e-46
AT3G22360.1 | alternative oxidase 1B | Chr3:7904156-7905384 FORW... 148 2e-45
AT3G27620.1 | alternative oxidase 1C | Chr3:10229289-10230595 RE... 143 1e-43
AT5G64210.1 | alternative oxidase 2 | Chr5:25683965-25685664 REV... 131 1e-38
AT1G32350.2 | alternative oxidase 1D | Chr1:11667361-11668569 RE... 129 3e-38
>AT3G22370.1 | alternative oxidase 1A | Chr3:7906890-7908416 FORWARD
LENGTH=354 | 201606
Length = 354
Score = 150 bits (379), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 74/80 (92%)
Query: 1 MTFMEVAKPKWYERAMVIAVQGLFSNAYFLSYLVSPKLSHRIVGYLEEEAIHSYAEFLKE 60
MTFMEVAKPKWYERA+VI VQG+F NAYFL YL+SPK +HR+VGYLEEEAIHSY EFLKE
Sbjct: 227 MTFMEVAKPKWYERALVITVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKE 286
Query: 61 LDKGNIENVKAPAIAIDYWR 80
LDKGNIENV APAIAIDYWR
Sbjct: 287 LDKGNIENVPAPAIAIDYWR 306
>AT3G22360.1 | alternative oxidase 1B | Chr3:7904156-7905384 FORWARD
LENGTH=325 | 201606
Length = 325
Score = 148 bits (373), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%)
Query: 1 MTFMEVAKPKWYERAMVIAVQGLFSNAYFLSYLVSPKLSHRIVGYLEEEAIHSYAEFLKE 60
MTFMEVAKP WYERA+VIAVQG+F NAYFL YL+SPK +HR+VGYLEEEAIHSY EFLKE
Sbjct: 198 MTFMEVAKPNWYERALVIAVQGIFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKE 257
Query: 61 LDKGNIENVKAPAIAIDYWR 80
LD GNIENV APAIAIDYWR
Sbjct: 258 LDNGNIENVPAPAIAIDYWR 277
>AT3G27620.1 | alternative oxidase 1C | Chr3:10229289-10230595
REVERSE LENGTH=329 | 201606
Length = 329
Score = 143 bits (361), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 73/80 (91%)
Query: 1 MTFMEVAKPKWYERAMVIAVQGLFSNAYFLSYLVSPKLSHRIVGYLEEEAIHSYAEFLKE 60
MTFMEVAKPKWYERA+VI+VQG+F NAY + Y++SPK +HR+VGYLEEEAIHSY EFLKE
Sbjct: 202 MTFMEVAKPKWYERALVISVQGVFFNAYLIGYIISPKFAHRMVGYLEEEAIHSYTEFLKE 261
Query: 61 LDKGNIENVKAPAIAIDYWR 80
LD GNIENV APAIA+DYWR
Sbjct: 262 LDNGNIENVPAPAIAVDYWR 281
>AT5G64210.1 | alternative oxidase 2 | Chr5:25683965-25685664
REVERSE LENGTH=353 | 201606
Length = 353
Score = 131 bits (329), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 70/80 (87%)
Query: 1 MTFMEVAKPKWYERAMVIAVQGLFSNAYFLSYLVSPKLSHRIVGYLEEEAIHSYAEFLKE 60
MT ME+ KPKWYER +V+ VQG+F N++F+ Y++SP+L+HR+VGYLEEEAIHSY EFLK+
Sbjct: 226 MTMMELVKPKWYERLLVMLVQGIFFNSFFVCYVISPRLAHRVVGYLEEEAIHSYTEFLKD 285
Query: 61 LDKGNIENVKAPAIAIDYWR 80
+D G IENV APAIAIDYWR
Sbjct: 286 IDNGKIENVAAPAIAIDYWR 305
>AT1G32350.2 | alternative oxidase 1D | Chr1:11667361-11668569
REVERSE LENGTH=309 | 201606
Length = 309
Score = 129 bits (324), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 70/80 (87%)
Query: 1 MTFMEVAKPKWYERAMVIAVQGLFSNAYFLSYLVSPKLSHRIVGYLEEEAIHSYAEFLKE 60
MTF+E+++PKWYERA+V VQG+F NAYFL+Y++SPKL+HRI GYLEEEA++SY EFLK+
Sbjct: 191 MTFIELSQPKWYERAIVFTVQGVFFNAYFLAYVISPKLAHRITGYLEEEAVNSYTEFLKD 250
Query: 61 LDKGNIENVKAPAIAIDYWR 80
+D G EN APAIAIDYWR
Sbjct: 251 IDAGKFENSPAPAIAIDYWR 270