BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1910.1
(395 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18636.1 | Ta11-like non-LTR retrotransposon | Chr5:6211268-6... 66 1e-11
AT5G25200.1 | Ta11-like non-LTR retrotransposon | Chr5:8716766-8... 65 2e-11
AT2G02103.1 | Ta11-like non-LTR retrotransposon | Chr2:530425-53... 64 5e-11
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 64 6e-11
AT3G57587.1 | Ta11-like non-LTR retrotransposon | Chr3:21328263-... 62 4e-10
>AT5G18636.1 | Ta11-like non-LTR retrotransposon |
Chr5:6211268-6212371 FORWARD LENGTH=367 | 201606
Length = 367
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 82 VRFATASELDLTV--ESSPWVIQEELVILKPCQPDLAPADHLFETVWLWTQFHGLPSGRL 139
V+F A+E+DL + PW+ V Q +APA +L T+ LW Q G+P +
Sbjct: 78 VQFVFANEIDLMMVQRREPWLFNNWFVAATRWQ--VAPAHNLVTTIDLWVQIRGIPLPYV 135
Query: 140 NEATVNRLASSLGNFIPASQEDASQWSI-FGRIKIEYHLHKPIRDRVYLKLGANKIISIE 198
+E TV +A LG I +A+ I F R+++ + + +R + + + +I
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATIR 195
Query: 199 LRIEKLPRFCFYCGHIGHTLKFCP 222
+ E+L R C C H +CP
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCP 219
>AT5G25200.1 | Ta11-like non-LTR retrotransposon |
Chr5:8716766-8717869 REVERSE LENGTH=367 | 201606
Length = 367
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 82 VRFATASELDLTV--ESSPWVIQEELVILKPCQPDLAPADHLFETVWLWTQFHGLPSGRL 139
V+F A+E+DL + PW+ V Q +APA +L T+ LW Q G+P +
Sbjct: 78 VQFLFANEIDLMMVQRREPWLFNNWFVAATRWQ--VAPAHNLVTTIDLWVQIRGIPLPYV 135
Query: 140 NEATVNRLASSLGNFIPASQEDASQWSI-FGRIKIEYHLHKPIRDRVYLKLGANKIISIE 198
+E TV +A LG I +A+ I F R+++ + + +R + + + +I
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATIR 195
Query: 199 LRIEKLPRFCFYCGHIGHTLKFCP 222
+ E+L R C C H +CP
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCP 219
>AT2G02103.1 | Ta11-like non-LTR retrotransposon |
Chr2:530425-531636 REVERSE LENGTH=403 | 201606
Length = 403
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 82 VRFATASELDLTV--ESSPWVIQEELVILKPCQPDLAPADHLFETVWLWTQFHGLPSGRL 139
V+F A+E+DL + PW+ V Q +APA +L T+ LW Q G+P +
Sbjct: 78 VQFLFANEIDLLMVQRREPWLFNNWFVAATRWQ--VAPAHNLVTTIDLWVQIRGIPLPYV 135
Query: 140 NEATVNRLASSLGNFIPASQEDASQWSI-FGRIKIEYHLHKPIRDRVYLKLGANKIISIE 198
+E TV +A LG I +A+ I F R+++ + + +R + + + +I
Sbjct: 136 SEETVMEIAHDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRVIFDSGETATIR 195
Query: 199 LRIEKLPRFCFYCGHIGHTLKFCP 222
+ E+L R C C H +CP
Sbjct: 196 FQYERLRRLCSSCFRFTHNRAYCP 219
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 79 VFMVRFATASELDLTVESSPWVIQEELVILKPCQPDLAPADHLFETVWLWTQFHGLPSGR 138
F VRF + +L + +PWV E + L+ + P + + +W G+P
Sbjct: 77 CFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWED--FPTEDFLTFIDVWVHIRGIPLPY 134
Query: 139 LNEATVNRLASSLGNFIPAS-QEDASQWSIFGRIKIEYHLHKPIRDRVYLKLGANKIISI 197
++E TV +AS+LG + E+ + F R+K+ +P+R ++ + + I
Sbjct: 135 VSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAMI 194
Query: 198 ELRIEKLPRFCFYCGHIGHTLKFCPILM 225
EKL R C C + H + CP ++
Sbjct: 195 GFEYEKLQRVCTNCCRVNHQVSHCPYVV 222
>AT3G57587.1 | Ta11-like non-LTR retrotransposon |
Chr3:21328263-21329357 FORWARD LENGTH=364 | 201606
Length = 364
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 82 VRFATASELDL--TVESSPWVIQEELVILKPCQPDLAPADHLFETVWLWTQFHGLPSGRL 139
V+F +E+DL PW+ V + +P APA + ++ LW Q G+P +
Sbjct: 78 VQFLFQNEVDLQSVQRREPWIFNNWFVATQRWEP--APALNFVTSIDLWVQIRGIPLPYV 135
Query: 140 NEATVNRLASSLGNFIPASQEDASQWSI-FGRIKIEYHLHKPIRDRVYLKLGANKIISIE 198
E T +A LG I DA+ I + R+++ + + +R + + ++++I
Sbjct: 136 CEETALEIARDLGEVIMLDHHDATSTQITYIRVRVRFGITDRLRFFQRIIFDSGEVVTIR 195
Query: 199 LRIEKLPRFCFYCGHIGHTLKFCP 222
+ E+L R C C H +CP
Sbjct: 196 FQYERLRRICSSCFRFTHNRAYCP 219