BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g1970.1
(216 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G16250.1 | NDH-dependent cyclic electron flow 1 | Chr3:550709... 217 9e-72
AT4G32590.1 | 2Fe-2S ferredoxin-like superfamily protein | Chr4:... 94 4e-24
AT4G32590.3 | 2Fe-2S ferredoxin-like superfamily protein | Chr4:... 77 2e-17
AT4G32590.4 | 2Fe-2S ferredoxin-like superfamily protein | Chr4:... 49 3e-07
>AT3G16250.1 | NDH-dependent cyclic electron flow 1 |
Chr3:5507091-5508320 REVERSE LENGTH=204 | 201606
Length = 204
Score = 217 bits (553), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 116/146 (79%), Gaps = 1/146 (0%)
Query: 72 IRAVGSVPGVESETT-LVEEPPSIDFAFVSSVLLPDGTPDIHTRSACGGQKLRDIMLDSD 130
+RA+ + P + +EPP++DFAFV SVLLPDGTPD+H R A GGQKLRDIMLDS+
Sbjct: 47 VRAISTAPASQPPAADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSN 106
Query: 131 IELYGPYARPLLNCGGGGTCGTCIVEVIQGKEHLSLRTDKEKEILKKKPKTWRLACQTNV 190
IELYGPY++PL NC G GTC TC+VE++ GKE L+ RTD EKE LK+KPK WRLACQTNV
Sbjct: 107 IELYGPYSKPLSNCAGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNV 166
Query: 191 GKTDSRGQVVIQQLPEWKAHEWSIRK 216
G DS G VVIQQLPEWKAHEW+I K
Sbjct: 167 GNPDSTGLVVIQQLPEWKAHEWNIPK 192
>AT4G32590.1 | 2Fe-2S ferredoxin-like superfamily protein |
Chr4:15721417-15722776 FORWARD LENGTH=173 | 201606
Length = 173
Score = 94.4 bits (233), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
Query: 91 PPSIDFAFVSSVLLPDGTPDIHTRSACGGQKL-RDIMLDSDIELYGPYARPLLNCGGGGT 149
P I+ F DG+ + A G KL R IM D+ IELY Y + ++NCGGGG+
Sbjct: 55 PLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYGK-VMNCGGGGS 113
Query: 150 CGTCIVEVIQGKEHLSLRTDKEKEILKKKPKTWRLACQTNVGKTDSRGQVVIQQLPEWK 208
CGTCIVE++ G++ L+ RTD E LKKKP++WRLACQT VG ++ G+VV+Q++P+WK
Sbjct: 114 CGTCIVEILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWK 172
>AT4G32590.3 | 2Fe-2S ferredoxin-like superfamily protein |
Chr4:15721417-15722781 FORWARD LENGTH=180 | 201606
Length = 180
Score = 77.0 bits (188), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 91 PPSIDFAFVSSVLLPDGTPDIHTRSACGGQKL-RDIMLDSDIELYGPYARPLLNCGGGGT 149
P I+ F DG+ + A G KL R IM D+ IELY Y + ++NCGGGG+
Sbjct: 55 PLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYGK-VMNCGGGGS 113
Query: 150 CGTCIVEVIQGKEHLSLRTDKEKEILKKKPKTWRLACQTNVGKTDSRGQ 198
CGTCIVE++ G++ L+ RTD E LKKKP++WRLACQT VG ++ G+
Sbjct: 114 CGTCIVEILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSGK 162
>AT4G32590.4 | 2Fe-2S ferredoxin-like superfamily protein |
Chr4:15721417-15722781 FORWARD LENGTH=176 | 201606
Length = 176
Score = 49.3 bits (116), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 91 PPSIDFAFVSSVLLPDGTPDIHTRSACGGQKL-RDIMLDSDIELYGPYARPLLNCGGGGT 149
P I+ F DG+ + A G KL R IM D+ IELY Y + ++NCGGGG+
Sbjct: 55 PLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYGK-VMNCGGGGS 113
Query: 150 CGTCIVEVIQGKEHLSLRTDKEKEILKK 177
CGTCIVE++ G++ L+ RTD E LKK
Sbjct: 114 CGTCIVEILDGRDLLNERTDTENRYLKK 141