BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2000.1
(344 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 63 1e-10
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 54 1e-07
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 211 PWIMIGDLNCILDPTEK---LGGNIGSNSINSRITEIISDLGLMDVGFQGNPYTWSNKQF 267
PW+++GD N I TE + NI + + + D L+D+ +G YTWSN Q
Sbjct: 121 PWLVVGDFNQIASVTEHYSLMPSNISLQGLED-LQACMRDSDLVDLPCRGVLYTWSNHQ- 178
Query: 268 GENLIQERLDRALANLNWLHHFKSHGVIHLEAVGSDHMP-ILLDNKDSTHSKPKPFKFIR 326
+N I +LDRA+ N WL F + I SDH +++ N SK K FK+
Sbjct: 179 QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLSKKKSFKYFS 238
Query: 327 TWMTHPECFFYSGQLEA 343
THP+ F S L A
Sbjct: 239 FLSTHPD--FISSILAA 253
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 213 IMIGDLNCILDPTEKLGGNIGSNSINSRITE----IISDLGLMDVGFQGNPYTWSNKQFG 268
I++GD + I ++ ++ SI R E + D L+D+ +G YTWSN Q
Sbjct: 222 ILVGDFDQIAATSDHY--SVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-D 278
Query: 269 ENLIQERLDRALANLNWLHHFKSH-GVIHLEAVGSDHMPILLDNKDSTHSKPKPFKFIRT 327
+N I +LDRA+AN +W F S V L V SDH P ++ ++ K F++
Sbjct: 279 DNPIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSF 337
Query: 328 WMTHP 332
THP
Sbjct: 338 LSTHP 342