BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2020.1
(614 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 6e-35
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 142 6e-35
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 69 2e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (357), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 139/245 (56%), Gaps = 12/245 (4%)
Query: 375 EPRSIEECRQRLDWSKWKDAIQVELDSLNKRSIFGPVFLIPKDVNPVGFKWVFVRKRNEN 434
EP + E ++ L W A+ E+ ++ + + +P + P+G KWV+ K N +
Sbjct: 85 EPSTYNEAKEFLVWC---GAMDDEIGAMETTHTW-EICTLPPNKKPIGCKWVYKIKYNSD 140
Query: 435 NEIVRYKARLVAQVFLQKPGIDYEETYSPVMDAITFRYLISLAAQEELDMHILDVVIAYL 494
I RYKARLVA+ + Q+ GID+ ET+SPV + + +++++A +H LD+ A+L
Sbjct: 141 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 495 YGNLDTDIYMKVPEGFKLPEGK---PRIMYSLKLNRTLYGLKQSWRMWYNRLSEYLTKEG 551
G+LD +IYMK+P G+ +G P + LK +++YGLKQ+ R W+ + S L G
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 552 YVNDHICPCVFIKKSYTGYAIIAIYVDDINLIGTVED--VTKAAEYLKKEFEMKDLGKTK 609
+V H F+K + T + + +YVDDI +I + D V + LK F+++DLG K
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 610 FCIGL 614
+ +GL
Sbjct: 318 YFLGL 322
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 142 bits (357), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 139/245 (56%), Gaps = 12/245 (4%)
Query: 375 EPRSIEECRQRLDWSKWKDAIQVELDSLNKRSIFGPVFLIPKDVNPVGFKWVFVRKRNEN 434
EP + E ++ L W A+ E+ ++ + + +P + P+G KWV+ K N +
Sbjct: 85 EPSTYNEAKEFLVWC---GAMDDEIGAMETTHTW-EICTLPPNKKPIGCKWVYKIKYNSD 140
Query: 435 NEIVRYKARLVAQVFLQKPGIDYEETYSPVMDAITFRYLISLAAQEELDMHILDVVIAYL 494
I RYKARLVA+ + Q+ GID+ ET+SPV + + +++++A +H LD+ A+L
Sbjct: 141 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 495 YGNLDTDIYMKVPEGFKLPEGK---PRIMYSLKLNRTLYGLKQSWRMWYNRLSEYLTKEG 551
G+LD +IYMK+P G+ +G P + LK +++YGLKQ+ R W+ + S L G
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 552 YVNDHICPCVFIKKSYTGYAIIAIYVDDINLIGTVED--VTKAAEYLKKEFEMKDLGKTK 609
+V H F+K + T + + +YVDDI +I + D V + LK F+++DLG K
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 610 FCIGL 614
+ +GL
Sbjct: 318 YFLGL 322
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 69.3 bits (168), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
Query: 359 FSFAVATSILKENDDYEPRSIEECRQRLDWSKWKDAIQVELDSLNKRSIFGPVFLIPKDV 418
+S + T+I KE P+S+ + W + A+Q ELD+L++ + L+P V
Sbjct: 16 YSLTITTTIKKE-----PKSVIFALKDPGWCQ---AMQEELDALSRNKTW---ILVPPPV 64
Query: 419 NP--VGFKWVFVRKRNENNEIVRYKARLVAQVFLQKPGIDYEETYSPVMDAITFRYLISL 476
N +G KWVF K + + + R KARLVA+ F Q+ GI + ETYSPV+ T R ++++
Sbjct: 65 NQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
Query: 477 AAQEELDMHI 486
A Q E+ I
Sbjct: 125 AQQLEVGQSI 134