BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2030.1
(238 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 99 2e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 99 2e-23
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 64 4e-12
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 54 3e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 99.4 bits (246), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 39 YLSAIGSLLYFAQCTRPDISFAVNLLVRFSSAPTKRHWMGVKHILRYLRGITNMGLFDSK 98
Y IG L+Y Q TR DISFAVN L +FS AP H V IL Y++G GLF S
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYS- 435
Query: 99 NSSDDSQVTGYTDAGYLSDPHKGISQTGYVFTSGGTAFSWQSSKQSMPAISSNHSEIIAL 158
S + Q+ ++DA + S S GY G + SW+S KQ + + SS +E AL
Sbjct: 436 -SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 159 HEATRECIWLRSIISHIRISCELPEITKSPTIIYEDNAACITQIKEGYIKGDRTKHI 215
AT E +WL + +LP PT+++ DN A I I + +RTKHI
Sbjct: 495 SFATDEMMWLAQFFREL----QLP--LSKPTLLFCDNTAAI-HIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 99.4 bits (246), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 39 YLSAIGSLLYFAQCTRPDISFAVNLLVRFSSAPTKRHWMGVKHILRYLRGITNMGLFDSK 98
Y IG L+Y Q TR DISFAVN L +FS AP H V IL Y++G GLF S
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYS- 435
Query: 99 NSSDDSQVTGYTDAGYLSDPHKGISQTGYVFTSGGTAFSWQSSKQSMPAISSNHSEIIAL 158
S + Q+ ++DA + S S GY G + SW+S KQ + + SS +E AL
Sbjct: 436 -SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 159 HEATRECIWLRSIISHIRISCELPEITKSPTIIYEDNAACITQIKEGYIKGDRTKHI 215
AT E +WL + +LP PT+++ DN A I I + +RTKHI
Sbjct: 495 SFATDEMMWLAQFFREL----QLP--LSKPTLLFCDNTAAI-HIATNAVFHERTKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 64.3 bits (155), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
Query: 6 PLSTPMVVRSLDTVKDPYRPKEDNEALLGPEVPYLSAIGSLLYFAQCTRPDISFAVNLLV 65
P+STP+ ++ +V P + + S +G+L Y TRPDIS+AVN++
Sbjct: 76 PMSTPLPLKLNSSVSTAKYPDPSD---------FRSIVGALQYLT-LTRPDISYAVNIVC 125
Query: 66 RFSSAPTKRHWMGVKHILRYLRGITNMGLFDSKNSSDDSQVTGYTDAGYLSDPHKGISQT 125
+ PT + +K +LRY++G GL+ KNS + Q + D+ + S T
Sbjct: 126 QRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQ--AFCDSDWAGCTSTRRSTT 183
Query: 126 GYVFTSGGTAFSWQSSKQSMPAISSNHSEIIALHEATRECIW 167
G+ G SW + +Q + SS +E AL E W
Sbjct: 184 GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 53.9 bits (128), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 53 TRPDISFAVNLLVRFSSAPTKRHWMGVKHILRYLRGITNMGLFDSKNSSDDSQVTGYTDA 112
TRPD++FAVN L +FSSA V +L Y++G GLF S S D Q+ + D+
Sbjct: 6 TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS--DLQLKAFADS 63
Query: 113 GYLSDPHKGISQTGY 127
+ S P S TG+
Sbjct: 64 DWASCPDTRRSVTGF 78