BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2110.1
(137 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19570.1 | transmembrane protein | Chr5:6606739-6607152 FORWA... 155 2e-49
>AT5G19570.1 | transmembrane protein | Chr5:6606739-6607152 FORWARD
LENGTH=137 | 201606
Length = 137
Score = 155 bits (392), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 3 DVEKMIAIGLVWGITNSIMRKGALIWDQKLKSSSYSKQSQQQSKLYDRLLGYLKNWLNLL 62
D++KM+A+GLVWG TN+++R+GAL WD K KSSS ++ ++ +++ L++W+NLL
Sbjct: 4 DMDKMVAVGLVWGATNALIRRGALAWD-KTKSSSTTESHSPPLQIRRKIMIALRDWINLL 62
Query: 63 LTWQYSVPFLVNLSASASFFAILSDSPISLAVPVTNATTFAATAVSAMALGEETRIGFAL 122
L WQYS+PFL+NLSASA+FFA+LS +PISLAVPVTNATTFAATA + LGEET+IG AL
Sbjct: 63 LFWQYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIGLAL 122
Query: 123 FGTFLIVLGVWICIM 137
GT IV G+W+C++
Sbjct: 123 LGTSFIVFGIWLCVL 137