BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000051.1_g2290.1
         (182 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization...    58   5e-10
AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization...    58   5e-10

>AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization
           domain-containing protein | Chr4:6353172-6355591 FORWARD
           LENGTH=733 | 201606
          Length = 733

 Score = 58.2 bits (139), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)

Query: 109 IYDPSTWDSLDGKWKDLLAEKGPVRDLSIKKG-PKDRN-NMCFSSEFYTRYLSNGEKHDR 166
           I DP+ W ++D + +D L EKGP++ +  K   PK       FS  +Y R + NG+K DR
Sbjct: 62  ITDPANWKNIDRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDR 121

Query: 167 VWLVYSKNADKV 178
            WL+YSK +DKV
Sbjct: 122 NWLLYSKVSDKV 133


>AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization
           domain-containing protein | Chr4:6353172-6355591 FORWARD
           LENGTH=733 | 201606
          Length = 733

 Score = 58.2 bits (139), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)

Query: 109 IYDPSTWDSLDGKWKDLLAEKGPVRDLSIKKG-PKDRN-NMCFSSEFYTRYLSNGEKHDR 166
           I DP+ W ++D + +D L EKGP++ +  K   PK       FS  +Y R + NG+K DR
Sbjct: 62  ITDPANWKNIDRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDR 121

Query: 167 VWLVYSKNADKV 178
            WL+YSK +DKV
Sbjct: 122 NWLLYSKVSDKV 133


Top