BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2290.1
(182 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization... 58 5e-10
AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization... 58 5e-10
>AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 58.2 bits (139), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 109 IYDPSTWDSLDGKWKDLLAEKGPVRDLSIKKG-PKDRN-NMCFSSEFYTRYLSNGEKHDR 166
I DP+ W ++D + +D L EKGP++ + K PK FS +Y R + NG+K DR
Sbjct: 62 ITDPANWKNIDRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDR 121
Query: 167 VWLVYSKNADKV 178
WL+YSK +DKV
Sbjct: 122 NWLLYSKVSDKV 133
>AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 58.2 bits (139), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 109 IYDPSTWDSLDGKWKDLLAEKGPVRDLSIKKG-PKDRN-NMCFSSEFYTRYLSNGEKHDR 166
I DP+ W ++D + +D L EKGP++ + K PK FS +Y R + NG+K DR
Sbjct: 62 ITDPANWKNIDRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDR 121
Query: 167 VWLVYSKNADKV 178
WL+YSK +DKV
Sbjct: 122 NWLLYSKVSDKV 133