BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2330.1
(287 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 63 3e-12
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 61 2e-11
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 62.8 bits (151), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 135 LNRKLLEKARCMRSNSGLGVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYER 194
+NR ++EK R M GL + A++ TA +I+N+ P ++++ +P EVW Y
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 195 LKVFSCTAYYHVKGNKLDNRAKKA 218
L+ F C AY H KL RAKK
Sbjct: 61 LRRFGCVAYIHCDEGKLKPRAKKG 84
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 61.2 bits (147), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 1 MGFCEHCVFGKAHRVTFSTSKHRSKEVLDYVHTDVWGPTKLP 42
+ FCE C++GK HRV FST +H +K LDYVH+D+WG +P
Sbjct: 101 LKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVP 142