BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2340.1
(408 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G20590.1 | Reticulon family protein | Chr2:8867243-8869166 RE... 288 1e-93
AT2G20590.3 | Reticulon family protein | Chr2:8867243-8869166 RE... 285 1e-92
AT4G28430.1 | Reticulon family protein | Chr4:14057846-14059772 ... 284 1e-91
AT2G20590.2 | Reticulon family protein | Chr2:8867781-8869166 RE... 218 8e-68
AT5G58000.1 | Reticulon family protein | Chr5:23477416-23479496 ... 171 3e-48
>AT2G20590.1 | Reticulon family protein | Chr2:8867243-8869166
REVERSE LENGTH=431 | 201606
Length = 431
Score = 288 bits (736), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/389 (45%), Positives = 240/389 (61%), Gaps = 18/389 (4%)
Query: 1 MNSTPSSHRSS--SSLRLNSSSRISRNNKEDDQNNSSPLSLQTSNLVPLKELLLLSPSPL 58
M STP HRS+ S+ RL SS + N D SSP + S+ VPL+++LLL PSPL
Sbjct: 1 MESTPPYHRSNTKSASRLQDSS--NPPNLSLDLVLSSPNTPNPSSPVPLRDILLLPPSPL 58
Query: 59 RKSRTHLPEKTESLEEPIDLMGSRSRRCKSRGSPMGGLLSCGSPRNSRRTRRRFDQEIRE 118
RKSRT L ++ E E D M +R K +G L S R R E E
Sbjct: 59 RKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGGQKSLLAS-----PRNPRRSRRRSEAVE 111
Query: 119 EREFGLG-EDNGK--TKKRRQSNRFRKEKLSLVLSTTSLPSPKTDIEIDDQNRLNHIWQL 175
E+E L E+ K +KR+ + R +K+K S S L S +D+ Q+ LN I ++
Sbjct: 112 EKEANLVIEEIVKLPPRKRKTNGRPKKDKQS---SAPPLCS-SSDLPNTCQSDLNLIGEI 167
Query: 176 LIDLIMWKDVSKSIFWFGLGSLFFLSSCFARSFRFSVISAISQLGLLFLAATFFHNSFSK 235
+ DL+MW+DV+KS WFG G L FLSSCFA+ FSV SA+S LGL+ L +F N+ +
Sbjct: 168 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 227
Query: 236 RQESDEQLDFNLKEDDIIRLASLILPFANLVTNNMRKIFSGKPSMTLKVAPILLVGAEYG 295
R+ D + F++ EDD++R A +LP N + ++FSG+PSMTLKV P LL+GAEYG
Sbjct: 228 RKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEYG 287
Query: 296 DSITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVEYIRDWLVEAWGASSHKKIVAASAVT 355
ITLWRL GFF+SFT+PK+YS Y+ Q+ ++VE ++ + EAWG SHKKI+A SAVT
Sbjct: 288 HLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSAVT 347
Query: 356 VFWNLSSIKARIFSAFISVVILRYYRQQV 384
FWNL+SI+ RIF+ FI +VI RY RQ +
Sbjct: 348 AFWNLTSIRTRIFAVFIILVIFRYRRQNL 376
>AT2G20590.3 | Reticulon family protein | Chr2:8867243-8869166
REVERSE LENGTH=418 | 201606
Length = 418
Score = 285 bits (729), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/387 (44%), Positives = 231/387 (59%), Gaps = 27/387 (6%)
Query: 1 MNSTPSSHRSS--SSLRLNSSSRISRNNKEDDQNNSSPLSLQTSNLVPLKELLLLSPSPL 58
M STP HRS+ S+ RL SS + N D SSP + S+ VPL+++LLL PSPL
Sbjct: 1 MESTPPYHRSNTKSASRLQDSS--NPPNLSLDLVLSSPNTPNPSSPVPLRDILLLPPSPL 58
Query: 59 RKSRTHLPEKTESLEEPIDLMGSRSRRCKSRGSPMGGLLSCGSPRNSRRTRRRFDQEIRE 118
RKSRT L ++ E E D M +R K +G L S R R E E
Sbjct: 59 RKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGGQKSLLAS-----PRNPRRSRRRSEAVE 111
Query: 119 EREFGLG-EDNGKTKKRRQSNRFRKEKLSLVLSTTSLPSPKTDIEIDDQNRLNHIWQLLI 177
E+E L E+ K R++ R PK D + Q+ LN I +++
Sbjct: 112 EKEANLVIEEIVKLPPRKRKTNGR---------------PKKDKQNTCQSDLNLIGEIIS 156
Query: 178 DLIMWKDVSKSIFWFGLGSLFFLSSCFARSFRFSVISAISQLGLLFLAATFFHNSFSKRQ 237
DL+MW+DV+KS WFG G L FLSSCFA+ FSV SA+S LGL+ L +F N+ +R+
Sbjct: 157 DLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQRK 216
Query: 238 ESDEQLDFNLKEDDIIRLASLILPFANLVTNNMRKIFSGKPSMTLKVAPILLVGAEYGDS 297
D + F++ EDD++R A +LP N + ++FSG+PSMTLKV P LL+GAEYG
Sbjct: 217 NEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEYGHL 276
Query: 298 ITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVEYIRDWLVEAWGASSHKKIVAASAVTVF 357
ITLWRL GFF+SFT+PK+YS Y+ Q+ ++VE ++ + EAWG SHKKI+A SAVT F
Sbjct: 277 ITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSAVTAF 336
Query: 358 WNLSSIKARIFSAFISVVILRYYRQQV 384
WNL+SI+ RIF+ FI +VI RY RQ +
Sbjct: 337 WNLTSIRTRIFAVFIILVIFRYRRQNL 363
>AT4G28430.1 | Reticulon family protein | Chr4:14057846-14059772
FORWARD LENGTH=457 | 201606
Length = 457
Score = 284 bits (726), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/412 (43%), Positives = 248/412 (60%), Gaps = 40/412 (9%)
Query: 2 NSTPSSHRSSSSLRLNSSSRISRNNKEDDQNNSSPLSL--------------------QT 41
+TP S RS++ S+ R++RNNK +++ L L
Sbjct: 4 TTTPPSLRSNT----RSALRLARNNKTLVKSHIPSLDLVLLSPKNNNGTPYPSPVSLSSP 59
Query: 42 SNLVPLKELLLLSPSPLRKSRTHLPEK--TESLEEPIDLMGSRSRRCKSRGSPMGGLLSC 99
S+ V L+E+LLLSPSPLRKSRT L + E+ E + +RR K++G GLL+
Sbjct: 60 SSPVTLREILLLSPSPLRKSRTRLSNRFDMEAAEAAVT-----ARRSKTKGG-QNGLLAS 113
Query: 100 GSPRNSRRTRRRFDQ--EIREERE---FGLGEDNGKTKKRRQSNRFRKEKLSLVLSTTSL 154
SPRN RR+R R + + +E E E +K+++ R +KEK S V S
Sbjct: 114 PSPRNFRRSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLAS- 172
Query: 155 PSPKTDIEID-DQNRLNHIWQLLIDLIMWKDVSKSIFWFGLGSLFFLSSCFA-RSFRFSV 212
PSP +D D Q L I + + DLIMW+DV+KS WFG G + FLS+CFA + F FSV
Sbjct: 173 PSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSV 232
Query: 213 ISAISQLGLLFLAATFFHNSFSKRQESDEQLDFNLKEDDIIRLASLILPFANLVTNNMRK 272
SAIS LGLLFL +F N+ +R + + + L EDD++R+A +LP NL + +
Sbjct: 233 FSAISYLGLLFLGVSFLSNTLRQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSE 292
Query: 273 IFSGKPSMTLKVAPILLVGAEYGDSITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVEYI 332
+FSG+P+MTLKVAP +L+GAEYG ITLWRLC GFF+SFT+PK+YS Y+ QL ++VE
Sbjct: 293 LFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECA 352
Query: 333 RDWLVEAWGASSHKKIVAASAVTVFWNLSSIKARIFSAFISVVILRYYRQQV 384
+ VEAWG +HKK VA SAVT FWNL+S+K R + FI VV++RY RQ +
Sbjct: 353 QRRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNL 404
>AT2G20590.2 | Reticulon family protein | Chr2:8867781-8869166
REVERSE LENGTH=323 | 201606
Length = 323
Score = 218 bits (555), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 198/335 (59%), Gaps = 18/335 (5%)
Query: 1 MNSTPSSHRSS--SSLRLNSSSRISRNNKEDDQNNSSPLSLQTSNLVPLKELLLLSPSPL 58
M STP HRS+ S+ RL SS + N D SSP + S+ VPL+++LLL PSPL
Sbjct: 1 MESTPPYHRSNTKSASRLQDSS--NPPNLSLDLVLSSPNTPNPSSPVPLRDILLLPPSPL 58
Query: 59 RKSRTHLPEKTESLEEPIDLMGSRSRRCKSRGSPMGGLLSCGSPRNSRRTRRRFDQEIRE 118
RKSRT L ++ E E D M +R K +G LL+ R R E E
Sbjct: 59 RKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGG-QKSLLA----SPRNPRRSRRRSEAVE 111
Query: 119 EREFGLG-EDNGK--TKKRRQSNRFRKEKLSLVLSTTSLPSPKTDIEIDDQNRLNHIWQL 175
E+E L E+ K +KR+ + R +K+K S S +D+ Q+ LN I ++
Sbjct: 112 EKEANLVIEEIVKLPPRKRKTNGRPKKDKQSSAPPLCS----SSDLPNTCQSDLNLIGEI 167
Query: 176 LIDLIMWKDVSKSIFWFGLGSLFFLSSCFARSFRFSVISAISQLGLLFLAATFFHNSFSK 235
+ DL+MW+DV+KS WFG G L FLSSCFA+ FSV SA+S LGL+ L +F N+ +
Sbjct: 168 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 227
Query: 236 RQESDEQLDFNLKEDDIIRLASLILPFANLVTNNMRKIFSGKPSMTLKVAPILLVGAEYG 295
R+ D + F++ EDD++R A +LP N + ++FSG+PSMTLKV P LL+GAEYG
Sbjct: 228 RKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEYG 287
Query: 296 DSITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVE 330
ITLWRL GFF+SFT+PK+YS Y+ Q+ ++ E
Sbjct: 288 HLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKGE 322
>AT5G58000.1 | Reticulon family protein | Chr5:23477416-23479496
FORWARD LENGTH=487 | 201606
Length = 487
Score = 171 bits (433), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 174 QLLIDLIMWKDVSKSIFWFGLGSLFFLSSCFARSFRFSVISAISQLGLLFLAATFFHNSF 233
Q L+DL+MW+DVS+S FG G+ +SS +A FS IS ++ +GL++L F S
Sbjct: 228 QSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSL 287
Query: 234 SKRQESDEQLD--FNLKEDDIIRLASLILPFANLVTNNMRKIFSGKPSMTLKVAPILLVG 291
R +E+ ++E+D+ R+ LI+P+ N + +R +FSG PS TLK+ +L V
Sbjct: 288 IHRGMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVL 347
Query: 292 AEYGDSITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVEYIRDWLVEAWGASSHKKIVAA 351
A G SITLW L GF +FT+PKI+ SYS + +AW + +HKK VA
Sbjct: 348 ARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVAL 407
Query: 352 SAVTVFWNLSSIKARIFSAFISVVILRYYRQQV 384
+ T+ WNLSS+ AR+++AF+ +V RYY+ ++
Sbjct: 408 ALFTLVWNLSSVTARVWAAFMLLVAFRYYQHKM 440