BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2370.1
(98 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869... 80 1e-19
>AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869941
FORWARD LENGTH=211 | 201606
Length = 211
Score = 79.7 bits (195), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 1 MFGVFKSWYAIFKSATPFPFTTQAEVVLTCARLHNFLCKESHNDQFLVEDD-NDQSYIV- 58
+FG+FKS +AIFKSA PF + QA +VLTCA LHNFL KE +D+ D+ ++ +V
Sbjct: 104 IFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFLRKECRSDEADFPDEVGNEGDVVN 163
Query: 59 --PVPLTNDEIDKELIFRSQQQ-RQEVNKWRDNLSNSMWEDV 97
+ +EID E +Q+Q R+ N WR +++ MW+D
Sbjct: 164 NEGNAMNTNEIDNEEPLEAQKQDRENTNMWRKSMAEDMWKDA 205