BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2390.1
(799 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 143 8e-35
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 143 8e-35
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 122 4e-31
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 49 7e-07
AT2G24250.2 | LOW protein: F-box/kelch-repeat protein (DUF295) |... 50 7e-06
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 134/251 (53%), Gaps = 11/251 (4%)
Query: 504 IKNLKDQLAGEFAMKDLGEARQFLGMRISRDKSKGTLMLSQAEYIERVLKRFNMEGAKPV 563
+ LK QL F ++DLG + FLG+ I+R S + + Q +Y +L + G KP
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 564 GMPLGSHFKLSKLQSPVTDVEKEFMAGVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYSS 623
+P+ S +F+ Y IG LMY + TR DI+ AV +S++S
Sbjct: 355 SVPMDPSVTFSAHSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 624 NPGKQHWEAVKWILRYLRGSTNVPLCYGRRNSV-LNGYVDADFAGDLDKRRSTTGYVYTL 682
P H +AV IL Y++G+ L Y + + L + DA F D RRST GY L
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 683 GSTAVSWNSRLQKLVTLSTTEAEYVAVTEASKEMIWLKGLLAELGHE-KKNSILYSDSQS 741
G++ +SW S+ Q++V+ S+ EAEY A++ A+ EM+WL EL K ++L+ D+ +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 742 AIHLAKNSAYH 752
AIH+A N+ +H
Sbjct: 528 AIHIATNAVFH 538
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 134/251 (53%), Gaps = 11/251 (4%)
Query: 504 IKNLKDQLAGEFAMKDLGEARQFLGMRISRDKSKGTLMLSQAEYIERVLKRFNMEGAKPV 563
+ LK QL F ++DLG + FLG+ I+R S + + Q +Y +L + G KP
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 564 GMPLGSHFKLSKLQSPVTDVEKEFMAGVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYSS 623
+P+ S +F+ Y IG LMY + TR DI+ AV +S++S
Sbjct: 355 SVPMDPSVTFSAHSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 624 NPGKQHWEAVKWILRYLRGSTNVPLCYGRRNSV-LNGYVDADFAGDLDKRRSTTGYVYTL 682
P H +AV IL Y++G+ L Y + + L + DA F D RRST GY L
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 683 GSTAVSWNSRLQKLVTLSTTEAEYVAVTEASKEMIWLKGLLAELGHE-KKNSILYSDSQS 741
G++ +SW S+ Q++V+ S+ EAEY A++ A+ EM+WL EL K ++L+ D+ +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 742 AIHLAKNSAYH 752
AIH+A N+ +H
Sbjct: 528 AIHIATNAVFH 538
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 122 bits (307), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 13/225 (5%)
Query: 496 VAGTSLQEIKNLKDQLAGEFAMKDLGEARQFLGMRISRDKSKGTLMLSQAEYIERVLKRF 555
+ G+S + L QL+ F+MKDLG FLG++I S L LSQ +Y E++L
Sbjct: 12 LTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNA 69
Query: 556 NMEGAKPVGMPLGSHFKLSKLQSPVTDVEKEFMAGVPYASAIGSLMYAMVCTRPDIAHAV 615
M KP+ PL KL S V+ ++ + S +G+L Y + TRPDI++AV
Sbjct: 70 GMLDCKPMSTPLPL-----KLNSSVS--TAKYPDPSDFRSIVGALQY-LTLTRPDISYAV 121
Query: 616 GVVSRYSSNPGKQHWEAVKWILRYLRGSTNVPLCYGRRNSVLN--GYVDADFAGDLDKRR 673
+V + P ++ +K +LRY++G+ L Y +NS LN + D+D+AG RR
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL-YIHKNSKLNVQAFCDSDWAGCTSTRR 180
Query: 674 STTGYVYTLGSTAVSWNSRLQKLVTLSTTEAEYVAVTEASKEMIW 718
STTG+ LG +SW+++ Q V+ S+TE EY A+ + E+ W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 601 MYAMVCTRPDIAHAVGVVSRYSSNPGKQHWEAVKWILRYLRGSTNVPLCYGRRNSV-LNG 659
MY + TRPD+ AV +S++SS +AV +L Y++G+ L Y + + L
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 660 YVDADFAGDLDKRRSTTGY 678
+ D+D+A D RRS TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78
>AT2G24250.2 | LOW protein: F-box/kelch-repeat protein (DUF295) |
Chr2:10313436-10314560 REVERSE LENGTH=374 | 201606
Length = 374
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 239 PHVN---YIESSNELFQVIKYVKIPGSTDILDFKVFKMNFSVMMWEEVHDLGDHVLFLGG 295
PH++ + S NE ++K TD L +V +++ W EV DLGD VLFLGG
Sbjct: 244 PHIDSNFLVPSGNEELFLVK-------TDFLRCRVSRLDEEAAEWVEVSDLGDRVLFLGG 296
Query: 296 QT-TASCSATDL----GLTRGCIYYTQDRKNILYKF 326
CSA +L GLT I +T +N+ Y +
Sbjct: 297 HLGNFYCSAKELPHGCGLTGDSILFTVGSRNVTYPY 332