BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0070.1
(290 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 216 2e-63
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 216 2e-63
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 96 2e-23
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 87 2e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 216 bits (549), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 164/264 (62%), Gaps = 9/264 (3%)
Query: 4 LGCKWVFRLKQKSDGSIERYKDRLVAKGFHQQEGVDYAETFSPVVKSNTIRTVVVTRS-- 61
+GCKWV+++K SDG+IERYK RLVAKG+ QQEG+D+ ETFSPV K +++ ++ +
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 62 -WHIKQLDVSNAFLHDTLDEAVFMVQASDFIQSGKESY----VCYLYKALYGLKQAPRAW 116
+ + QLD+SNAFL+ LDE ++M + +S VCYL K++YGLKQA R W
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 117 STKFATFLYSYGFHKSKKDHSMFVLHSSTSTMVLLLYVDDIILTSSSVTQINCLINDLSV 176
KF+ L +GF +S DH+ F+ ++T + +L+YVDDII+ S++ ++ L + L
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306
Query: 177 AYKMKDLEPLAYFLGIEVTHNQQQRYMMLTQNKYALQLLQKAELLNSKPSKLPVSNGQRI 236
+K++DL PL YFLG+E+ + + + Q KYAL LL + LL KPS +P+
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTF 364
Query: 237 SLTDGDELPNPTEYRSLVGALQYL 260
S G + + YR L+G L YL
Sbjct: 365 SAHSGGDFVDAKAYRRLIGRLMYL 388
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 216 bits (549), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 164/264 (62%), Gaps = 9/264 (3%)
Query: 4 LGCKWVFRLKQKSDGSIERYKDRLVAKGFHQQEGVDYAETFSPVVKSNTIRTVVVTRS-- 61
+GCKWV+++K SDG+IERYK RLVAKG+ QQEG+D+ ETFSPV K +++ ++ +
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 62 -WHIKQLDVSNAFLHDTLDEAVFMVQASDFIQSGKESY----VCYLYKALYGLKQAPRAW 116
+ + QLD+SNAFL+ LDE ++M + +S VCYL K++YGLKQA R W
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 117 STKFATFLYSYGFHKSKKDHSMFVLHSSTSTMVLLLYVDDIILTSSSVTQINCLINDLSV 176
KF+ L +GF +S DH+ F+ ++T + +L+YVDDII+ S++ ++ L + L
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306
Query: 177 AYKMKDLEPLAYFLGIEVTHNQQQRYMMLTQNKYALQLLQKAELLNSKPSKLPVSNGQRI 236
+K++DL PL YFLG+E+ + + + Q KYAL LL + LL KPS +P+
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTF 364
Query: 237 SLTDGDELPNPTEYRSLVGALQYL 260
S G + + YR L+G L YL
Sbjct: 365 SAHSGGDFVDAKAYRRLIGRLMYL 388
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 96.3 bits (238), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 148 MVLLLYVDDIILTSSSVTQINCLINDLSVAYKMKDLEPLAYFLGIEV-THNQQQRYMMLT 206
M LLLYVDDI+LT SS T +N LI LS + MKDL P+ YFLGI++ TH + L+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG---LFLS 57
Query: 207 QNKYALQLLQKAELLNSKPSKLPVSNGQRISLTDGDELPNPTEYRSLVGALQYL 260
Q KYA Q+L A +L+ KP P+ S++ + P+P+++RS+VGALQYL
Sbjct: 58 QTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYL 110
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 86.7 bits (213), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 48/56 (85%)
Query: 2 NVLGCKWVFRLKQKSDGSIERYKDRLVAKGFHQQEGVDYAETFSPVVKSNTIRTVV 57
N+LGCKWVF+ K SDG+++R K RLVAKGFHQ+EG+ + ET+SPVV++ TIRT++
Sbjct: 67 NILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122