BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0080.1
(155 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 102 1e-25
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 102 1e-25
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 82 1e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 102 bits (254), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%)
Query: 1 MGSGLKISHGDFTSLTTYSDSDWVGCPDSRKSTGGYCVFLGSTLISWCSKKQATVAKSST 60
+G GL S L +SD+ + C D+R+ST GYC+FLG++LISW SKKQ V+KSS
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487
Query: 61 EAEYKVLSNTATEMVWISYLMDELGCTMKKALLLYCENISAKYLASKS 108
EAEY+ LS EM+W++ EL + K LL+C+N +A ++A+ +
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNA 535
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 102 bits (254), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 70/108 (64%)
Query: 1 MGSGLKISHGDFTSLTTYSDSDWVGCPDSRKSTGGYCVFLGSTLISWCSKKQATVAKSST 60
+G GL S L +SD+ + C D+R+ST GYC+FLG++LISW SKKQ V+KSS
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487
Query: 61 EAEYKVLSNTATEMVWISYLMDELGCTMKKALLLYCENISAKYLASKS 108
EAEY+ LS EM+W++ EL + K LL+C+N +A ++A+ +
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNA 535
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 82.4 bits (202), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 4 GLKISHGDFTSLTTYSDSDWVGCPDSRKSTGGYCVFLGSTLISWCSKKQATVAKSSTEAE 63
GL I ++ + DSDW GC +R+ST G+C FLG +ISW +K+Q TV++SSTE E
Sbjct: 153 GLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETE 212
Query: 64 YKVLSNTATEMVWIS 78
Y+ L+ TA E+ W S
Sbjct: 213 YRALALTAAELTWSS 227