BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0090.1
(87 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49880.1 | mitotic checkpoint family protein | Chr5:20282305-... 71 7e-16
>AT5G49880.1 | mitotic checkpoint family protein |
Chr5:20282305-20287775 FORWARD LENGTH=726 | 201606
Length = 726
Score = 71.2 bits (173), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 2 AWKSLTNDIPGVSSPSDIRIKFTSLRKEVTENMTTVGQVIACMKRMEVTLKEAELGRQHV 61
+WKSL NDIPGVS P DI ++F+ L+ EV ++ +G+ +K++E TL+ +LGRQ+
Sbjct: 345 SWKSLLNDIPGVSCPDDIVMRFSVLQNEVVQSTMKIGEASTRIKQLEETLEAIQLGRQNA 404
Query: 62 EFVASLANQKAEDSESKVKR 81
A+LA +K+E ++ VKR
Sbjct: 405 VSEAALAKEKSEALKTDVKR 424