BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000054.1_g0110.1
         (366 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17290.1 | autophagy protein Apg5 family | Chr5:5687160-56898...   422   e-148

>AT5G17290.1 | autophagy protein Apg5 family | Chr5:5687160-5689821
           REVERSE LENGTH=337 | 201606
          Length = 337

 Score =  422 bits (1084), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 210/359 (58%), Positives = 262/359 (72%), Gaps = 33/359 (9%)

Query: 4   VGSEGQKYVWEGSIPLQIHLHESEITTLPSPPPALIMGPRIGYLPLLVPLIKPYFSGTLP 63
           +  E  KYVWEG+IPLQIHLH+S++ + P+PPPAL++ PRIGYLPLL+PLIKPYF  +LP
Sbjct: 1   MAKEAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLP 60

Query: 64  PGADTVWFDYKGMPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGDLLSPWEGEDSVK 123
           PG D++WFDYKG PLKWYIPTGVLFDLLCAEPERPWNLT+HFRGYP ++L P EGEDSVK
Sbjct: 61  PGEDSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVK 120

Query: 124 WSFINSLKEAAYIINGNSKNVMNMSQVDQTDLWRSILNRDMEVYLRISSKLKLGTVGEDH 183
           W+F+NSLKEA YIINGN KNVMNMSQ DQ DLW S++N D++ Y R+S KLK+GTV ++ 
Sbjct: 121 WNFVNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEF 180

Query: 184 AKK--VMSP--RQADPES--TGSSRSGRIPVRLYIRNVGEYIGDLEDVPPLDSWDRISYV 237
           ++K  + SP  +Q  PE+   G  ++ RIPVRLY+R++ +   +LEDVP +D+WD ISY+
Sbjct: 181 SRKTSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYL 240

Query: 238 NKPVEVHRGEEGKIFTLQDAVKFLLPEFFPDEPSIDEEISRMALEGELQTTESNTGDQDV 297
           N+PVE  + EEGK FTL+DA+K LLPEF  D      E      E  +  TE   G +++
Sbjct: 241 NRPVEFLK-EEGKCFTLRDAIKSLLPEFMGDRAQTSGE------ERSIDDTEEADGSREM 293

Query: 298 NTNTATKAEEGASTFPPSIKSEIKLIRIQGIEPKLDIPFSWVVTNLMNPEHFLHICVCV 356
                                EIKL+RIQGIE KL+IPFSWVV NLMNPE +LHI V V
Sbjct: 294 --------------------GEIKLVRIQGIEMKLEIPFSWVVNNLMNPEFYLHISVLV 332

Top