BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0180.1
(116 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 44 8e-06
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 43.5 bits (101), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 8 RGQNSEECECLAILRATQWMKQLRIKRVLIQSDNQNLINYLTSKQTTIHWQS-EKYLDEI 66
R +N E E A+ A M + KR++ +SD Q L+N L S W + + L++I
Sbjct: 183 RTKNVLEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDD---FWPTLQPALEDI 239
Query: 67 GNLKKQFDYIAFRHIARENNKEADKLAK 94
L F+ + F R NK AD++A+
Sbjct: 240 QQLLHHFEEVKFEFTPRGGNKVADRIAR 267