BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0300.1
(89 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 82 1e-20
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 79 2e-20
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 74 8e-17
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 74 8e-17
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 82.4 bits (202), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%)
Query: 1 MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
+TRPD++YAVN Q M +P + L+K+ LRYVKGTI G+ I ++ + D D
Sbjct: 112 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
Query: 61 WAGCPDSRRSTNGFCVVLG 79
WAGC +RRST GFC LG
Sbjct: 172 WAGCTSTRRSTTGFCTFLG 190
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 78.6 bits (192), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 1 MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
+TRPDL +AVN +QF R++ +Q + K L YVKGT+ G+ + +L+ ++D D
Sbjct: 5 ITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSD 64
Query: 61 WAGCPDSRRSTNGFCVVLGQSGLWVL 86
WA CPD+RRS GFC ++ LW L
Sbjct: 65 WASCPDTRRSVTGFCSLV---PLWFL 87
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 73.9 bits (180), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 1 MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
+TR D+++AVN +QF + PR +H Q + K L Y+KGT+ G+ + +L+ +SD
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 61 WAGCPDSRRSTNGFCVVLGQS 81
+ C D+RRSTNG+C+ LG S
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTS 470
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 73.9 bits (180), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 1 MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
+TR D+++AVN +QF + PR +H Q + K L Y+KGT+ G+ + +L+ +SD
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 61 WAGCPDSRRSTNGFCVVLGQS 81
+ C D+RRSTNG+C+ LG S
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTS 470