BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0310.1
(335 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 150 4e-40
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 150 4e-40
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 82 5e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 150 bits (380), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 129 YSETFSHVVKAATIRTVLNVVVSNGRKIHQLDVSNAFLHGILHENVYMTQPQGFI----D 184
+ ETFS V K +++ +L + +HQLD+SNAFL+G L E +YM P G+ D
Sbjct: 163 FIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGD 222
Query: 185 LKYPSYVCHLHKSFYGLKQAPKAWFQRFGSFLLTLGFKRSAHDHSMFVQQTESATMVLLL 244
P+ VC+L KS YGLKQA + WF +F L+ GF +S DH+ F++ T + + +L+
Sbjct: 223 SLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLV 282
Query: 245 YVDDIILTGSCDSLMTALVATLSKEFAMKMLGHLHFFLGIEVTRAESSVLFLTQKKYALS 304
YVDDII+ + D+ + L + L F ++ LG L +FLG+E+ R+ + + + Q+KYAL
Sbjct: 283 YVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGI-NICQRKYALD 341
Query: 305 LLEKAALPDSKPSCTPV 321
LL++ L KPS P+
Sbjct: 342 LLDETGLLGCKPSSVPM 358
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 150 bits (380), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Query: 129 YSETFSHVVKAATIRTVLNVVVSNGRKIHQLDVSNAFLHGILHENVYMTQPQGFI----D 184
+ ETFS V K +++ +L + +HQLD+SNAFL+G L E +YM P G+ D
Sbjct: 163 FIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGD 222
Query: 185 LKYPSYVCHLHKSFYGLKQAPKAWFQRFGSFLLTLGFKRSAHDHSMFVQQTESATMVLLL 244
P+ VC+L KS YGLKQA + WF +F L+ GF +S DH+ F++ T + + +L+
Sbjct: 223 SLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLV 282
Query: 245 YVDDIILTGSCDSLMTALVATLSKEFAMKMLGHLHFFLGIEVTRAESSVLFLTQKKYALS 304
YVDDII+ + D+ + L + L F ++ LG L +FLG+E+ R+ + + + Q+KYAL
Sbjct: 283 YVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGI-NICQRKYALD 341
Query: 305 LLEKAALPDSKPSCTPV 321
LL++ L KPS P+
Sbjct: 342 LLDETGLLGCKPSSVPM 358
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 82.4 bits (202), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 240 MVLLLYVDDIILTGSCDSLMTALVATLSKEFAMKMLGHLHFFLGIEVTRAESSVLFLTQK 299
M LLLYVDDI+LTGS ++L+ L+ LS F+MK LG +H+FLGI++ + S LFL+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLFLSQT 59
Query: 300 KYALSLLEKAALPDSKPSCTPV 321
KYA +L A + D KP TP+
Sbjct: 60 KYAEQILNNAGMLDCKPMSTPL 81