BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0320.1
(146 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 102 7e-26
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 102 7e-26
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 102 bits (254), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 16 LVPSDPSTKNGLDYSETFSHVVKAATIRIVLNVVVSNGWKIQQLDVSNAFLHGILHENVY 75
LV + + G+D+ ETFS V K +++++L + + + QLD+SNAFL+G L E +Y
Sbjct: 150 LVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIY 209
Query: 76 MTQPQGFI----DLKYSSYVCHLHKSLYGLKQALRAWFQRFGSFLLKLGFKRSVHDHSMF 131
M P G+ D + VC+L KS+YGLKQA R WF +F L+ GF +S DH+ F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 132 VQQTESVMMVLLQY 145
++ T ++ + +L Y
Sbjct: 270 LKITATLFLCVLVY 283
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 102 bits (254), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 16 LVPSDPSTKNGLDYSETFSHVVKAATIRIVLNVVVSNGWKIQQLDVSNAFLHGILHENVY 75
LV + + G+D+ ETFS V K +++++L + + + QLD+SNAFL+G L E +Y
Sbjct: 150 LVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIY 209
Query: 76 MTQPQGFI----DLKYSSYVCHLHKSLYGLKQALRAWFQRFGSFLLKLGFKRSVHDHSMF 131
M P G+ D + VC+L KS+YGLKQA R WF +F L+ GF +S DH+ F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 132 VQQTESVMMVLLQY 145
++ T ++ + +L Y
Sbjct: 270 LKITATLFLCVLVY 283